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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism evvi: Vitis vinifera (wine grape) (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
evvi00010 Glycolysis / Gluconeogenesis SBML MML
evvi00020 Citrate cycle (TCA cycle) SBML MML
evvi00030 Pentose phosphate pathway SBML MML
evvi00031 (Undocumented) SBML MML
evvi00040 Pentose and glucuronate interconversions SBML MML
evvi00051 Fructose and mannose metabolism SBML MML
evvi00052 Galactose metabolism SBML MML
evvi00053 Ascorbate and aldarate metabolism SBML MML
evvi00061 Fatty acid biosynthesis SBML MML
evvi00071 Fatty acid metabolism SBML MML
evvi00072 Synthesis and degradation of ketone bodies SBML MML
evvi00100 (Undocumented) SBML MML
evvi00120 (Undocumented) SBML MML
evvi00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
evvi00140 (Undocumented) SBML MML
evvi00150 Androgen and estrogen metabolism SBML MML
evvi00220 (Undocumented) SBML MML
evvi00230 Purine metabolism SBML MML
evvi00232 Caffeine metabolism SBML MML
evvi00240 Pyrimidine metabolism SBML MML
evvi00251 (Undocumented) SBML MML
evvi00252 (Undocumented) SBML MML
evvi00260 Glycine, serine and threonine metabolism SBML MML
evvi00271 (Undocumented) SBML MML
evvi00272 (Undocumented) SBML MML
evvi00280 Valine, leucine and isoleucine degradation SBML MML
evvi00281 Geraniol degradation SBML MML
evvi00290 Valine, leucine and isoleucine biosynthesis SBML MML
evvi00300 Lysine biosynthesis SBML MML
evvi00310 Lysine degradation SBML MML
evvi00311 Penicillin and cephalosporin biosynthesis SBML MML
evvi00330 Arginine and proline metabolism SBML MML
evvi00340 Histidine metabolism SBML MML
evvi00350 Tyrosine metabolism SBML MML
evvi00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
evvi00360 Phenylalanine metabolism SBML MML
evvi00361 gamma-Hexachlorocyclohexane degradation SBML MML
evvi00362 (Undocumented) SBML MML
evvi00363 Bisphenol A degradation SBML MML
evvi00380 Tryptophan metabolism SBML MML
evvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
evvi00401 Novobiocin biosynthesis SBML MML
evvi00410 beta-Alanine metabolism SBML MML
evvi00430 Taurine and hypotaurine metabolism SBML MML
evvi00440 Phosphonate and phosphinate metabolism SBML MML
evvi00450 Selenoamino acid metabolism SBML MML
evvi00460 (Undocumented) SBML MML
evvi00471 D-Glutamine and D-glutamate metabolism SBML MML
evvi00473 D-Alanine metabolism SBML MML
evvi00480 Glutathione metabolism SBML MML
evvi00500 Starch and sucrose metabolism SBML MML
evvi00510 (Undocumented) SBML MML
evvi00520 Amino sugar and nucleotide sugar metabolism SBML MML
evvi00521 Streptomycin biosynthesis SBML MML
evvi00523 Polyketide sugar unit biosynthesis SBML MML
evvi00530 (Undocumented) SBML MML
evvi00540 Lipopolysaccharide biosynthesis SBML MML
evvi00550 Peptidoglycan biosynthesis SBML MML
evvi00561 Glycerolipid metabolism SBML MML
evvi00562 Inositol phosphate metabolism SBML MML
evvi00564 Glycerophospholipid metabolism SBML MML
evvi00565 Ether lipid metabolism SBML MML
evvi00590 Arachidonic acid metabolism SBML MML
evvi00591 Linoleic acid metabolism SBML MML
evvi00592 alpha-Linolenic acid metabolism SBML MML
evvi00600 Sphingolipid metabolism SBML MML
evvi00620 Pyruvate metabolism SBML MML
evvi00623 2,4-Dichlorobenzoate degradation SBML MML
evvi00624 1- and 2-Methylnaphthalene degradation SBML MML
evvi00625 (Undocumented) SBML MML
evvi00626 Naphthalene and anthracene degradation SBML MML
evvi00628 Fluorene degradation SBML MML
evvi00630 Glyoxylate and dicarboxylate metabolism SBML MML
evvi00632 (Undocumented) SBML MML
evvi00640 Propanoate metabolism SBML MML
evvi00641 3-Chloroacrylic acid degradation SBML MML
evvi00642 Ethylbenzene degradation SBML MML
evvi00643 Styrene degradation SBML MML
evvi00650 Butanoate metabolism SBML MML
evvi00660 C5-Branched dibasic acid metabolism SBML MML
evvi00670 One carbon pool by folate SBML MML
evvi00680 Methane metabolism SBML MML
evvi00710 (Undocumented) SBML MML
evvi00720 (Undocumented) SBML MML
evvi00730 Thiamine metabolism SBML MML
evvi00740 Riboflavin metabolism SBML MML
evvi00750 Vitamin B6 metabolism SBML MML
evvi00760 Nicotinate and nicotinamide metabolism SBML MML
evvi00770 Pantothenate and CoA biosynthesis SBML MML
evvi00780 Biotin metabolism SBML MML
evvi00790 Folate biosynthesis SBML MML
evvi00791 Atrazine degradation SBML MML
evvi00860 Porphyrin and chlorophyll metabolism SBML MML
evvi00900 Terpenoid backbone biosynthesis SBML MML
evvi00901 (Undocumented) SBML MML
evvi00902 Monoterpenoid biosynthesis SBML MML
evvi00903 (Undocumented) SBML MML
evvi00904 (Undocumented) SBML MML
evvi00906 Carotenoid biosynthesis SBML MML
evvi00908 (Undocumented) SBML MML
evvi00910 Nitrogen metabolism SBML MML
evvi00920 Sulfur metabolism SBML MML
evvi00930 Caprolactam degradation SBML MML
evvi00940 (Undocumented) SBML MML
evvi00941 (Undocumented) SBML MML
evvi00944 (Undocumented) SBML MML
evvi00950 (Undocumented) SBML MML
evvi00960 (Undocumented) SBML MML
evvi00970 Aminoacyl-tRNA biosynthesis SBML MML
evvi00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
evvi00982 (Undocumented) SBML MML
evvi00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.