This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism eta: Erwinia tasmaniensis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
eta00010 Glycolysis / Gluconeogenesis SBML MML
eta00020 Citrate cycle (TCA cycle) SBML MML
eta00030 Pentose phosphate pathway SBML MML
eta00031 (Undocumented) SBML MML
eta00040 Pentose and glucuronate interconversions SBML MML
eta00051 Fructose and mannose metabolism SBML MML
eta00052 Galactose metabolism SBML MML
eta00053 Ascorbate and aldarate metabolism SBML MML
eta00061 Fatty acid biosynthesis SBML MML
eta00071 Fatty acid metabolism SBML MML
eta00100 (Undocumented) SBML MML
eta00120 (Undocumented) SBML MML
eta00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
eta00150 Androgen and estrogen metabolism SBML MML
eta00220 (Undocumented) SBML MML
eta00230 Purine metabolism SBML MML
eta00240 Pyrimidine metabolism SBML MML
eta00251 (Undocumented) SBML MML
eta00252 (Undocumented) SBML MML
eta00260 Glycine, serine and threonine metabolism SBML MML
eta00271 (Undocumented) SBML MML
eta00272 (Undocumented) SBML MML
eta00280 Valine, leucine and isoleucine degradation SBML MML
eta00281 Geraniol degradation SBML MML
eta00290 Valine, leucine and isoleucine biosynthesis SBML MML
eta00300 Lysine biosynthesis SBML MML
eta00310 Lysine degradation SBML MML
eta00330 Arginine and proline metabolism SBML MML
eta00340 Histidine metabolism SBML MML
eta00350 Tyrosine metabolism SBML MML
eta00360 Phenylalanine metabolism SBML MML
eta00361 gamma-Hexachlorocyclohexane degradation SBML MML
eta00362 (Undocumented) SBML MML
eta00363 Bisphenol A degradation SBML MML
eta00364 Fluorobenzoate degradation SBML MML
eta00380 Tryptophan metabolism SBML MML
eta00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
eta00401 Novobiocin biosynthesis SBML MML
eta00410 beta-Alanine metabolism SBML MML
eta00430 Taurine and hypotaurine metabolism SBML MML
eta00440 Phosphonate and phosphinate metabolism SBML MML
eta00450 Selenoamino acid metabolism SBML MML
eta00460 (Undocumented) SBML MML
eta00471 D-Glutamine and D-glutamate metabolism SBML MML
eta00473 D-Alanine metabolism SBML MML
eta00480 Glutathione metabolism SBML MML
eta00500 Starch and sucrose metabolism SBML MML
eta00520 Amino sugar and nucleotide sugar metabolism SBML MML
eta00521 Streptomycin biosynthesis SBML MML
eta00523 Polyketide sugar unit biosynthesis SBML MML
eta00530 (Undocumented) SBML MML
eta00540 Lipopolysaccharide biosynthesis SBML MML
eta00550 Peptidoglycan biosynthesis SBML MML
eta00561 Glycerolipid metabolism SBML MML
eta00562 Inositol phosphate metabolism SBML MML
eta00564 Glycerophospholipid metabolism SBML MML
eta00590 Arachidonic acid metabolism SBML MML
eta00592 alpha-Linolenic acid metabolism SBML MML
eta00620 Pyruvate metabolism SBML MML
eta00622 Toluene and xylene degradation SBML MML
eta00624 1- and 2-Methylnaphthalene degradation SBML MML
eta00626 Naphthalene and anthracene degradation SBML MML
eta00627 1,4-Dichlorobenzene degradation SBML MML
eta00628 Fluorene degradation SBML MML
eta00630 Glyoxylate and dicarboxylate metabolism SBML MML
eta00632 (Undocumented) SBML MML
eta00633 Trinitrotoluene degradation SBML MML
eta00640 Propanoate metabolism SBML MML
eta00641 3-Chloroacrylic acid degradation SBML MML
eta00642 Ethylbenzene degradation SBML MML
eta00650 Butanoate metabolism SBML MML
eta00660 C5-Branched dibasic acid metabolism SBML MML
eta00670 One carbon pool by folate SBML MML
eta00680 Methane metabolism SBML MML
eta00710 (Undocumented) SBML MML
eta00720 (Undocumented) SBML MML
eta00730 Thiamine metabolism SBML MML
eta00740 Riboflavin metabolism SBML MML
eta00750 Vitamin B6 metabolism SBML MML
eta00760 Nicotinate and nicotinamide metabolism SBML MML
eta00770 Pantothenate and CoA biosynthesis SBML MML
eta00780 Biotin metabolism SBML MML
eta00790 Folate biosynthesis SBML MML
eta00791 Atrazine degradation SBML MML
eta00860 Porphyrin and chlorophyll metabolism SBML MML
eta00900 Terpenoid backbone biosynthesis SBML MML
eta00903 (Undocumented) SBML MML
eta00910 Nitrogen metabolism SBML MML
eta00920 Sulfur metabolism SBML MML
eta00930 Caprolactam degradation SBML MML
eta00940 (Undocumented) SBML MML
eta00950 (Undocumented) SBML MML
eta00960 (Undocumented) SBML MML
eta00970 Aminoacyl-tRNA biosynthesis SBML MML
eta00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
eta00982 (Undocumented) SBML MML
eta00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.