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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism estu: Solanum tuberosum (potato) (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
estu00010 Glycolysis / Gluconeogenesis SBML MML
estu00020 Citrate cycle (TCA cycle) SBML MML
estu00030 Pentose phosphate pathway SBML MML
estu00031 (Undocumented) SBML MML
estu00040 Pentose and glucuronate interconversions SBML MML
estu00051 Fructose and mannose metabolism SBML MML
estu00052 Galactose metabolism SBML MML
estu00053 Ascorbate and aldarate metabolism SBML MML
estu00061 Fatty acid biosynthesis SBML MML
estu00071 Fatty acid metabolism SBML MML
estu00072 Synthesis and degradation of ketone bodies SBML MML
estu00100 (Undocumented) SBML MML
estu00120 (Undocumented) SBML MML
estu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
estu00140 (Undocumented) SBML MML
estu00150 Androgen and estrogen metabolism SBML MML
estu00220 (Undocumented) SBML MML
estu00230 Purine metabolism SBML MML
estu00232 Caffeine metabolism SBML MML
estu00240 Pyrimidine metabolism SBML MML
estu00251 (Undocumented) SBML MML
estu00252 (Undocumented) SBML MML
estu00260 Glycine, serine and threonine metabolism SBML MML
estu00271 (Undocumented) SBML MML
estu00272 (Undocumented) SBML MML
estu00280 Valine, leucine and isoleucine degradation SBML MML
estu00281 Geraniol degradation SBML MML
estu00290 Valine, leucine and isoleucine biosynthesis SBML MML
estu00300 Lysine biosynthesis SBML MML
estu00310 Lysine degradation SBML MML
estu00330 Arginine and proline metabolism SBML MML
estu00340 Histidine metabolism SBML MML
estu00350 Tyrosine metabolism SBML MML
estu00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
estu00360 Phenylalanine metabolism SBML MML
estu00361 gamma-Hexachlorocyclohexane degradation SBML MML
estu00362 (Undocumented) SBML MML
estu00363 Bisphenol A degradation SBML MML
estu00380 Tryptophan metabolism SBML MML
estu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
estu00401 Novobiocin biosynthesis SBML MML
estu00410 beta-Alanine metabolism SBML MML
estu00430 Taurine and hypotaurine metabolism SBML MML
estu00440 Phosphonate and phosphinate metabolism SBML MML
estu00450 Selenoamino acid metabolism SBML MML
estu00460 (Undocumented) SBML MML
estu00471 D-Glutamine and D-glutamate metabolism SBML MML
estu00480 Glutathione metabolism SBML MML
estu00500 Starch and sucrose metabolism SBML MML
estu00510 (Undocumented) SBML MML
estu00520 Amino sugar and nucleotide sugar metabolism SBML MML
estu00521 Streptomycin biosynthesis SBML MML
estu00530 (Undocumented) SBML MML
estu00540 Lipopolysaccharide biosynthesis SBML MML
estu00550 Peptidoglycan biosynthesis SBML MML
estu00561 Glycerolipid metabolism SBML MML
estu00562 Inositol phosphate metabolism SBML MML
estu00564 Glycerophospholipid metabolism SBML MML
estu00565 Ether lipid metabolism SBML MML
estu00590 Arachidonic acid metabolism SBML MML
estu00591 Linoleic acid metabolism SBML MML
estu00592 alpha-Linolenic acid metabolism SBML MML
estu00600 Sphingolipid metabolism SBML MML
estu00620 Pyruvate metabolism SBML MML
estu00623 2,4-Dichlorobenzoate degradation SBML MML
estu00624 1- and 2-Methylnaphthalene degradation SBML MML
estu00625 (Undocumented) SBML MML
estu00626 Naphthalene and anthracene degradation SBML MML
estu00628 Fluorene degradation SBML MML
estu00630 Glyoxylate and dicarboxylate metabolism SBML MML
estu00631 1,2-Dichloroethane degradation SBML MML
estu00632 (Undocumented) SBML MML
estu00633 Trinitrotoluene degradation SBML MML
estu00640 Propanoate metabolism SBML MML
estu00641 3-Chloroacrylic acid degradation SBML MML
estu00642 Ethylbenzene degradation SBML MML
estu00643 Styrene degradation SBML MML
estu00650 Butanoate metabolism SBML MML
estu00670 One carbon pool by folate SBML MML
estu00680 Methane metabolism SBML MML
estu00710 (Undocumented) SBML MML
estu00720 (Undocumented) SBML MML
estu00730 Thiamine metabolism SBML MML
estu00740 Riboflavin metabolism SBML MML
estu00750 Vitamin B6 metabolism SBML MML
estu00760 Nicotinate and nicotinamide metabolism SBML MML
estu00770 Pantothenate and CoA biosynthesis SBML MML
estu00780 Biotin metabolism SBML MML
estu00790 Folate biosynthesis SBML MML
estu00791 Atrazine degradation SBML MML
estu00860 Porphyrin and chlorophyll metabolism SBML MML
estu00900 Terpenoid backbone biosynthesis SBML MML
estu00901 (Undocumented) SBML MML
estu00903 (Undocumented) SBML MML
estu00904 (Undocumented) SBML MML
estu00906 Carotenoid biosynthesis SBML MML
estu00908 (Undocumented) SBML MML
estu00910 Nitrogen metabolism SBML MML
estu00920 Sulfur metabolism SBML MML
estu00930 Caprolactam degradation SBML MML
estu00940 (Undocumented) SBML MML
estu00941 (Undocumented) SBML MML
estu00944 (Undocumented) SBML MML
estu00950 (Undocumented) SBML MML
estu00960 (Undocumented) SBML MML
estu00970 Aminoacyl-tRNA biosynthesis SBML MML
estu00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
estu00982 (Undocumented) SBML MML
estu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.