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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism eosi: Oryza sativa indica (Indian rice) (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
eosi00010 Glycolysis / Gluconeogenesis SBML MML
eosi00020 Citrate cycle (TCA cycle) SBML MML
eosi00030 Pentose phosphate pathway SBML MML
eosi00031 (Undocumented) SBML MML
eosi00040 Pentose and glucuronate interconversions SBML MML
eosi00051 Fructose and mannose metabolism SBML MML
eosi00052 Galactose metabolism SBML MML
eosi00053 Ascorbate and aldarate metabolism SBML MML
eosi00061 Fatty acid biosynthesis SBML MML
eosi00062 Fatty acid elongation in mitochondria SBML MML
eosi00071 Fatty acid metabolism SBML MML
eosi00072 Synthesis and degradation of ketone bodies SBML MML
eosi00100 (Undocumented) SBML MML
eosi00120 (Undocumented) SBML MML
eosi00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
eosi00140 (Undocumented) SBML MML
eosi00150 Androgen and estrogen metabolism SBML MML
eosi00220 (Undocumented) SBML MML
eosi00230 Purine metabolism SBML MML
eosi00232 Caffeine metabolism SBML MML
eosi00240 Pyrimidine metabolism SBML MML
eosi00251 (Undocumented) SBML MML
eosi00252 (Undocumented) SBML MML
eosi00260 Glycine, serine and threonine metabolism SBML MML
eosi00271 (Undocumented) SBML MML
eosi00272 (Undocumented) SBML MML
eosi00280 Valine, leucine and isoleucine degradation SBML MML
eosi00281 Geraniol degradation SBML MML
eosi00290 Valine, leucine and isoleucine biosynthesis SBML MML
eosi00300 Lysine biosynthesis SBML MML
eosi00310 Lysine degradation SBML MML
eosi00311 Penicillin and cephalosporin biosynthesis SBML MML
eosi00330 Arginine and proline metabolism SBML MML
eosi00340 Histidine metabolism SBML MML
eosi00350 Tyrosine metabolism SBML MML
eosi00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
eosi00360 Phenylalanine metabolism SBML MML
eosi00361 gamma-Hexachlorocyclohexane degradation SBML MML
eosi00362 (Undocumented) SBML MML
eosi00363 Bisphenol A degradation SBML MML
eosi00380 Tryptophan metabolism SBML MML
eosi00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
eosi00401 Novobiocin biosynthesis SBML MML
eosi00410 beta-Alanine metabolism SBML MML
eosi00430 Taurine and hypotaurine metabolism SBML MML
eosi00440 Phosphonate and phosphinate metabolism SBML MML
eosi00450 Selenoamino acid metabolism SBML MML
eosi00460 (Undocumented) SBML MML
eosi00471 D-Glutamine and D-glutamate metabolism SBML MML
eosi00472 D-Arginine and D-ornithine metabolism SBML MML
eosi00473 D-Alanine metabolism SBML MML
eosi00480 Glutathione metabolism SBML MML
eosi00500 Starch and sucrose metabolism SBML MML
eosi00510 (Undocumented) SBML MML
eosi00520 Amino sugar and nucleotide sugar metabolism SBML MML
eosi00521 Streptomycin biosynthesis SBML MML
eosi00523 Polyketide sugar unit biosynthesis SBML MML
eosi00530 (Undocumented) SBML MML
eosi00540 Lipopolysaccharide biosynthesis SBML MML
eosi00550 Peptidoglycan biosynthesis SBML MML
eosi00561 Glycerolipid metabolism SBML MML
eosi00562 Inositol phosphate metabolism SBML MML
eosi00564 Glycerophospholipid metabolism SBML MML
eosi00565 Ether lipid metabolism SBML MML
eosi00590 Arachidonic acid metabolism SBML MML
eosi00591 Linoleic acid metabolism SBML MML
eosi00592 alpha-Linolenic acid metabolism SBML MML
eosi00600 Sphingolipid metabolism SBML MML
eosi00620 Pyruvate metabolism SBML MML
eosi00624 1- and 2-Methylnaphthalene degradation SBML MML
eosi00625 (Undocumented) SBML MML
eosi00626 Naphthalene and anthracene degradation SBML MML
eosi00628 Fluorene degradation SBML MML
eosi00630 Glyoxylate and dicarboxylate metabolism SBML MML
eosi00631 1,2-Dichloroethane degradation SBML MML
eosi00632 (Undocumented) SBML MML
eosi00633 Trinitrotoluene degradation SBML MML
eosi00640 Propanoate metabolism SBML MML
eosi00641 3-Chloroacrylic acid degradation SBML MML
eosi00642 Ethylbenzene degradation SBML MML
eosi00643 Styrene degradation SBML MML
eosi00650 Butanoate metabolism SBML MML
eosi00660 C5-Branched dibasic acid metabolism SBML MML
eosi00670 One carbon pool by folate SBML MML
eosi00680 Methane metabolism SBML MML
eosi00710 (Undocumented) SBML MML
eosi00720 (Undocumented) SBML MML
eosi00730 Thiamine metabolism SBML MML
eosi00740 Riboflavin metabolism SBML MML
eosi00750 Vitamin B6 metabolism SBML MML
eosi00760 Nicotinate and nicotinamide metabolism SBML MML
eosi00770 Pantothenate and CoA biosynthesis SBML MML
eosi00780 Biotin metabolism SBML MML
eosi00790 Folate biosynthesis SBML MML
eosi00791 Atrazine degradation SBML MML
eosi00860 Porphyrin and chlorophyll metabolism SBML MML
eosi00900 Terpenoid backbone biosynthesis SBML MML
eosi00901 (Undocumented) SBML MML
eosi00902 Monoterpenoid biosynthesis SBML MML
eosi00903 (Undocumented) SBML MML
eosi00904 (Undocumented) SBML MML
eosi00906 Carotenoid biosynthesis SBML MML
eosi00908 (Undocumented) SBML MML
eosi00910 Nitrogen metabolism SBML MML
eosi00920 Sulfur metabolism SBML MML
eosi00930 Caprolactam degradation SBML MML
eosi00940 (Undocumented) SBML MML
eosi00941 (Undocumented) SBML MML
eosi00944 (Undocumented) SBML MML
eosi00950 (Undocumented) SBML MML
eosi00960 (Undocumented) SBML MML
eosi00970 Aminoacyl-tRNA biosynthesis SBML MML
eosi00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
eosi00982 (Undocumented) SBML MML
eosi00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.