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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism eghi: Gossypium hirsutum (upland cotton) (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
eghi00010 Glycolysis / Gluconeogenesis SBML MML
eghi00020 Citrate cycle (TCA cycle) SBML MML
eghi00030 Pentose phosphate pathway SBML MML
eghi00031 (Undocumented) SBML MML
eghi00040 Pentose and glucuronate interconversions SBML MML
eghi00051 Fructose and mannose metabolism SBML MML
eghi00052 Galactose metabolism SBML MML
eghi00053 Ascorbate and aldarate metabolism SBML MML
eghi00061 Fatty acid biosynthesis SBML MML
eghi00062 Fatty acid elongation in mitochondria SBML MML
eghi00071 Fatty acid metabolism SBML MML
eghi00072 Synthesis and degradation of ketone bodies SBML MML
eghi00100 (Undocumented) SBML MML
eghi00120 (Undocumented) SBML MML
eghi00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
eghi00140 (Undocumented) SBML MML
eghi00150 Androgen and estrogen metabolism SBML MML
eghi00220 (Undocumented) SBML MML
eghi00230 Purine metabolism SBML MML
eghi00232 Caffeine metabolism SBML MML
eghi00240 Pyrimidine metabolism SBML MML
eghi00251 (Undocumented) SBML MML
eghi00252 (Undocumented) SBML MML
eghi00260 Glycine, serine and threonine metabolism SBML MML
eghi00271 (Undocumented) SBML MML
eghi00272 (Undocumented) SBML MML
eghi00280 Valine, leucine and isoleucine degradation SBML MML
eghi00281 Geraniol degradation SBML MML
eghi00290 Valine, leucine and isoleucine biosynthesis SBML MML
eghi00300 Lysine biosynthesis SBML MML
eghi00310 Lysine degradation SBML MML
eghi00330 Arginine and proline metabolism SBML MML
eghi00340 Histidine metabolism SBML MML
eghi00350 Tyrosine metabolism SBML MML
eghi00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
eghi00360 Phenylalanine metabolism SBML MML
eghi00361 gamma-Hexachlorocyclohexane degradation SBML MML
eghi00362 (Undocumented) SBML MML
eghi00363 Bisphenol A degradation SBML MML
eghi00380 Tryptophan metabolism SBML MML
eghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
eghi00401 Novobiocin biosynthesis SBML MML
eghi00410 beta-Alanine metabolism SBML MML
eghi00430 Taurine and hypotaurine metabolism SBML MML
eghi00440 Phosphonate and phosphinate metabolism SBML MML
eghi00450 Selenoamino acid metabolism SBML MML
eghi00460 (Undocumented) SBML MML
eghi00471 D-Glutamine and D-glutamate metabolism SBML MML
eghi00480 Glutathione metabolism SBML MML
eghi00500 Starch and sucrose metabolism SBML MML
eghi00510 (Undocumented) SBML MML
eghi00520 Amino sugar and nucleotide sugar metabolism SBML MML
eghi00521 Streptomycin biosynthesis SBML MML
eghi00530 (Undocumented) SBML MML
eghi00540 Lipopolysaccharide biosynthesis SBML MML
eghi00550 Peptidoglycan biosynthesis SBML MML
eghi00561 Glycerolipid metabolism SBML MML
eghi00562 Inositol phosphate metabolism SBML MML
eghi00564 Glycerophospholipid metabolism SBML MML
eghi00565 Ether lipid metabolism SBML MML
eghi00590 Arachidonic acid metabolism SBML MML
eghi00591 Linoleic acid metabolism SBML MML
eghi00592 alpha-Linolenic acid metabolism SBML MML
eghi00600 Sphingolipid metabolism SBML MML
eghi00620 Pyruvate metabolism SBML MML
eghi00624 1- and 2-Methylnaphthalene degradation SBML MML
eghi00625 (Undocumented) SBML MML
eghi00626 Naphthalene and anthracene degradation SBML MML
eghi00628 Fluorene degradation SBML MML
eghi00630 Glyoxylate and dicarboxylate metabolism SBML MML
eghi00632 (Undocumented) SBML MML
eghi00640 Propanoate metabolism SBML MML
eghi00641 3-Chloroacrylic acid degradation SBML MML
eghi00642 Ethylbenzene degradation SBML MML
eghi00643 Styrene degradation SBML MML
eghi00650 Butanoate metabolism SBML MML
eghi00660 C5-Branched dibasic acid metabolism SBML MML
eghi00670 One carbon pool by folate SBML MML
eghi00680 Methane metabolism SBML MML
eghi00710 (Undocumented) SBML MML
eghi00720 (Undocumented) SBML MML
eghi00730 Thiamine metabolism SBML MML
eghi00740 Riboflavin metabolism SBML MML
eghi00750 Vitamin B6 metabolism SBML MML
eghi00760 Nicotinate and nicotinamide metabolism SBML MML
eghi00770 Pantothenate and CoA biosynthesis SBML MML
eghi00780 Biotin metabolism SBML MML
eghi00790 Folate biosynthesis SBML MML
eghi00791 Atrazine degradation SBML MML
eghi00860 Porphyrin and chlorophyll metabolism SBML MML
eghi00900 Terpenoid backbone biosynthesis SBML MML
eghi00901 (Undocumented) SBML MML
eghi00903 (Undocumented) SBML MML
eghi00904 (Undocumented) SBML MML
eghi00906 Carotenoid biosynthesis SBML MML
eghi00908 (Undocumented) SBML MML
eghi00910 Nitrogen metabolism SBML MML
eghi00920 Sulfur metabolism SBML MML
eghi00930 Caprolactam degradation SBML MML
eghi00940 (Undocumented) SBML MML
eghi00941 (Undocumented) SBML MML
eghi00944 (Undocumented) SBML MML
eghi00950 (Undocumented) SBML MML
eghi00960 (Undocumented) SBML MML
eghi00970 Aminoacyl-tRNA biosynthesis SBML MML
eghi00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
eghi00982 (Undocumented) SBML MML
eghi00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.