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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ece: Escherichia coli O157 EDL933 (EHEC)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ece00010 Glycolysis / Gluconeogenesis SBML MML
ece00020 Citrate cycle (TCA cycle) SBML MML
ece00030 Pentose phosphate pathway SBML MML
ece00040 Pentose and glucuronate interconversions SBML MML
ece00051 Fructose and mannose metabolism SBML MML
ece00052 Galactose metabolism SBML MML
ece00053 Ascorbate and aldarate metabolism SBML MML
ece00061 Fatty acid biosynthesis SBML MML
ece00062 Fatty acid elongation in mitochondria SBML MML
ece00071 Fatty acid metabolism SBML MML
ece00100 (Undocumented) SBML MML
ece00120 (Undocumented) SBML MML
ece00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ece00150 Androgen and estrogen metabolism SBML MML
ece00220 (Undocumented) SBML MML
ece00230 Purine metabolism SBML MML
ece00240 Pyrimidine metabolism SBML MML
ece00251 (Undocumented) SBML MML
ece00252 (Undocumented) SBML MML
ece00260 Glycine, serine and threonine metabolism SBML MML
ece00271 (Undocumented) SBML MML
ece00272 (Undocumented) SBML MML
ece00280 Valine, leucine and isoleucine degradation SBML MML
ece00281 Geraniol degradation SBML MML
ece00290 Valine, leucine and isoleucine biosynthesis SBML MML
ece00300 Lysine biosynthesis SBML MML
ece00310 Lysine degradation SBML MML
ece00330 Arginine and proline metabolism SBML MML
ece00340 Histidine metabolism SBML MML
ece00350 Tyrosine metabolism SBML MML
ece00360 Phenylalanine metabolism SBML MML
ece00361 gamma-Hexachlorocyclohexane degradation SBML MML
ece00362 (Undocumented) SBML MML
ece00364 Fluorobenzoate degradation SBML MML
ece00380 Tryptophan metabolism SBML MML
ece00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ece00401 Novobiocin biosynthesis SBML MML
ece00410 beta-Alanine metabolism SBML MML
ece00430 Taurine and hypotaurine metabolism SBML MML
ece00450 Selenoamino acid metabolism SBML MML
ece00460 (Undocumented) SBML MML
ece00471 D-Glutamine and D-glutamate metabolism SBML MML
ece00473 D-Alanine metabolism SBML MML
ece00480 Glutathione metabolism SBML MML
ece00500 Starch and sucrose metabolism SBML MML
ece00520 Amino sugar and nucleotide sugar metabolism SBML MML
ece00521 Streptomycin biosynthesis SBML MML
ece00523 Polyketide sugar unit biosynthesis SBML MML
ece00530 (Undocumented) SBML MML
ece00540 Lipopolysaccharide biosynthesis SBML MML
ece00550 Peptidoglycan biosynthesis SBML MML
ece00561 Glycerolipid metabolism SBML MML
ece00564 Glycerophospholipid metabolism SBML MML
ece00590 Arachidonic acid metabolism SBML MML
ece00592 alpha-Linolenic acid metabolism SBML MML
ece00600 Sphingolipid metabolism SBML MML
ece00620 Pyruvate metabolism SBML MML
ece00621 (Undocumented) SBML MML
ece00622 Toluene and xylene degradation SBML MML
ece00624 1- and 2-Methylnaphthalene degradation SBML MML
ece00626 Naphthalene and anthracene degradation SBML MML
ece00627 1,4-Dichlorobenzene degradation SBML MML
ece00628 Fluorene degradation SBML MML
ece00629 Carbazole degradation SBML MML
ece00630 Glyoxylate and dicarboxylate metabolism SBML MML
ece00632 (Undocumented) SBML MML
ece00633 Trinitrotoluene degradation SBML MML
ece00640 Propanoate metabolism SBML MML
ece00641 3-Chloroacrylic acid degradation SBML MML
ece00642 Ethylbenzene degradation SBML MML
ece00643 Styrene degradation SBML MML
ece00650 Butanoate metabolism SBML MML
ece00660 C5-Branched dibasic acid metabolism SBML MML
ece00670 One carbon pool by folate SBML MML
ece00680 Methane metabolism SBML MML
ece00710 (Undocumented) SBML MML
ece00720 (Undocumented) SBML MML
ece00730 Thiamine metabolism SBML MML
ece00740 Riboflavin metabolism SBML MML
ece00750 Vitamin B6 metabolism SBML MML
ece00760 Nicotinate and nicotinamide metabolism SBML MML
ece00770 Pantothenate and CoA biosynthesis SBML MML
ece00780 Biotin metabolism SBML MML
ece00785 Lipoic acid metabolism SBML MML
ece00790 Folate biosynthesis SBML MML
ece00791 Atrazine degradation SBML MML
ece00860 Porphyrin and chlorophyll metabolism SBML MML
ece00900 Terpenoid backbone biosynthesis SBML MML
ece00903 (Undocumented) SBML MML
ece00910 Nitrogen metabolism SBML MML
ece00920 Sulfur metabolism SBML MML
ece00930 Caprolactam degradation SBML MML
ece00940 (Undocumented) SBML MML
ece00950 (Undocumented) SBML MML
ece00960 (Undocumented) SBML MML
ece00970 Aminoacyl-tRNA biosynthesis SBML MML
ece00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ece00982 (Undocumented) SBML MML
ece00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.