This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism dspd: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
dspd00010 Glycolysis / Gluconeogenesis SBML MML
dspd00020 Citrate cycle (TCA cycle) SBML MML
dspd00030 Pentose phosphate pathway SBML MML
dspd00040 Pentose and glucuronate interconversions SBML MML
dspd00051 Fructose and mannose metabolism SBML MML
dspd00052 Galactose metabolism SBML MML
dspd00053 Ascorbate and aldarate metabolism SBML MML
dspd00061 Fatty acid biosynthesis SBML MML
dspd00071 Fatty acid metabolism SBML MML
dspd00072 Synthesis and degradation of ketone bodies SBML MML
dspd00100 (Undocumented) SBML MML
dspd00120 (Undocumented) SBML MML
dspd00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
dspd00220 (Undocumented) SBML MML
dspd00230 Purine metabolism SBML MML
dspd00240 Pyrimidine metabolism SBML MML
dspd00251 (Undocumented) SBML MML
dspd00252 (Undocumented) SBML MML
dspd00260 Glycine, serine and threonine metabolism SBML MML
dspd00271 (Undocumented) SBML MML
dspd00272 (Undocumented) SBML MML
dspd00280 Valine, leucine and isoleucine degradation SBML MML
dspd00281 Geraniol degradation SBML MML
dspd00290 Valine, leucine and isoleucine biosynthesis SBML MML
dspd00300 Lysine biosynthesis SBML MML
dspd00310 Lysine degradation SBML MML
dspd00330 Arginine and proline metabolism SBML MML
dspd00340 Histidine metabolism SBML MML
dspd00350 Tyrosine metabolism SBML MML
dspd00360 Phenylalanine metabolism SBML MML
dspd00361 gamma-Hexachlorocyclohexane degradation SBML MML
dspd00362 (Undocumented) SBML MML
dspd00364 Fluorobenzoate degradation SBML MML
dspd00380 Tryptophan metabolism SBML MML
dspd00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
dspd00401 Novobiocin biosynthesis SBML MML
dspd00410 beta-Alanine metabolism SBML MML
dspd00430 Taurine and hypotaurine metabolism SBML MML
dspd00440 Phosphonate and phosphinate metabolism SBML MML
dspd00450 Selenoamino acid metabolism SBML MML
dspd00460 (Undocumented) SBML MML
dspd00480 Glutathione metabolism SBML MML
dspd00500 Starch and sucrose metabolism SBML MML
dspd00510 (Undocumented) SBML MML
dspd00520 Amino sugar and nucleotide sugar metabolism SBML MML
dspd00521 Streptomycin biosynthesis SBML MML
dspd00530 (Undocumented) SBML MML
dspd00550 Peptidoglycan biosynthesis SBML MML
dspd00561 Glycerolipid metabolism SBML MML
dspd00562 Inositol phosphate metabolism SBML MML
dspd00564 Glycerophospholipid metabolism SBML MML
dspd00565 Ether lipid metabolism SBML MML
dspd00590 Arachidonic acid metabolism SBML MML
dspd00591 Linoleic acid metabolism SBML MML
dspd00592 alpha-Linolenic acid metabolism SBML MML
dspd00600 Sphingolipid metabolism SBML MML
dspd00620 Pyruvate metabolism SBML MML
dspd00624 1- and 2-Methylnaphthalene degradation SBML MML
dspd00627 1,4-Dichlorobenzene degradation SBML MML
dspd00630 Glyoxylate and dicarboxylate metabolism SBML MML
dspd00632 (Undocumented) SBML MML
dspd00640 Propanoate metabolism SBML MML
dspd00641 3-Chloroacrylic acid degradation SBML MML
dspd00642 Ethylbenzene degradation SBML MML
dspd00643 Styrene degradation SBML MML
dspd00650 Butanoate metabolism SBML MML
dspd00670 One carbon pool by folate SBML MML
dspd00680 Methane metabolism SBML MML
dspd00710 (Undocumented) SBML MML
dspd00720 (Undocumented) SBML MML
dspd00730 Thiamine metabolism SBML MML
dspd00740 Riboflavin metabolism SBML MML
dspd00750 Vitamin B6 metabolism SBML MML
dspd00760 Nicotinate and nicotinamide metabolism SBML MML
dspd00770 Pantothenate and CoA biosynthesis SBML MML
dspd00780 Biotin metabolism SBML MML
dspd00790 Folate biosynthesis SBML MML
dspd00860 Porphyrin and chlorophyll metabolism SBML MML
dspd00900 Terpenoid backbone biosynthesis SBML MML
dspd00903 (Undocumented) SBML MML
dspd00910 Nitrogen metabolism SBML MML
dspd00920 Sulfur metabolism SBML MML
dspd00960 (Undocumented) SBML MML
dspd00970 Aminoacyl-tRNA biosynthesis SBML MML
dspd00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
dspd00982 (Undocumented) SBML MML
dspd00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.