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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism dcin: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
dcin00010 Glycolysis / Gluconeogenesis SBML MML
dcin00020 Citrate cycle (TCA cycle) SBML MML
dcin00030 Pentose phosphate pathway SBML MML
dcin00031 (Undocumented) SBML MML
dcin00040 Pentose and glucuronate interconversions SBML MML
dcin00051 Fructose and mannose metabolism SBML MML
dcin00052 Galactose metabolism SBML MML
dcin00053 Ascorbate and aldarate metabolism SBML MML
dcin00061 Fatty acid biosynthesis SBML MML
dcin00062 Fatty acid elongation in mitochondria SBML MML
dcin00071 Fatty acid metabolism SBML MML
dcin00072 Synthesis and degradation of ketone bodies SBML MML
dcin00100 (Undocumented) SBML MML
dcin00120 (Undocumented) SBML MML
dcin00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
dcin00140 (Undocumented) SBML MML
dcin00150 Androgen and estrogen metabolism SBML MML
dcin00220 (Undocumented) SBML MML
dcin00230 Purine metabolism SBML MML
dcin00232 Caffeine metabolism SBML MML
dcin00240 Pyrimidine metabolism SBML MML
dcin00251 (Undocumented) SBML MML
dcin00252 (Undocumented) SBML MML
dcin00260 Glycine, serine and threonine metabolism SBML MML
dcin00271 (Undocumented) SBML MML
dcin00272 (Undocumented) SBML MML
dcin00280 Valine, leucine and isoleucine degradation SBML MML
dcin00281 Geraniol degradation SBML MML
dcin00290 Valine, leucine and isoleucine biosynthesis SBML MML
dcin00300 Lysine biosynthesis SBML MML
dcin00310 Lysine degradation SBML MML
dcin00330 Arginine and proline metabolism SBML MML
dcin00340 Histidine metabolism SBML MML
dcin00350 Tyrosine metabolism SBML MML
dcin00360 Phenylalanine metabolism SBML MML
dcin00361 gamma-Hexachlorocyclohexane degradation SBML MML
dcin00362 (Undocumented) SBML MML
dcin00363 Bisphenol A degradation SBML MML
dcin00380 Tryptophan metabolism SBML MML
dcin00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
dcin00401 Novobiocin biosynthesis SBML MML
dcin00410 beta-Alanine metabolism SBML MML
dcin00430 Taurine and hypotaurine metabolism SBML MML
dcin00440 Phosphonate and phosphinate metabolism SBML MML
dcin00450 Selenoamino acid metabolism SBML MML
dcin00460 (Undocumented) SBML MML
dcin00471 D-Glutamine and D-glutamate metabolism SBML MML
dcin00472 D-Arginine and D-ornithine metabolism SBML MML
dcin00473 D-Alanine metabolism SBML MML
dcin00480 Glutathione metabolism SBML MML
dcin00500 Starch and sucrose metabolism SBML MML
dcin00510 (Undocumented) SBML MML
dcin00520 Amino sugar and nucleotide sugar metabolism SBML MML
dcin00521 Streptomycin biosynthesis SBML MML
dcin00523 Polyketide sugar unit biosynthesis SBML MML
dcin00530 (Undocumented) SBML MML
dcin00540 Lipopolysaccharide biosynthesis SBML MML
dcin00550 Peptidoglycan biosynthesis SBML MML
dcin00561 Glycerolipid metabolism SBML MML
dcin00562 Inositol phosphate metabolism SBML MML
dcin00564 Glycerophospholipid metabolism SBML MML
dcin00565 Ether lipid metabolism SBML MML
dcin00590 Arachidonic acid metabolism SBML MML
dcin00591 Linoleic acid metabolism SBML MML
dcin00592 alpha-Linolenic acid metabolism SBML MML
dcin00600 Sphingolipid metabolism SBML MML
dcin00620 Pyruvate metabolism SBML MML
dcin00624 1- and 2-Methylnaphthalene degradation SBML MML
dcin00625 (Undocumented) SBML MML
dcin00626 Naphthalene and anthracene degradation SBML MML
dcin00630 Glyoxylate and dicarboxylate metabolism SBML MML
dcin00631 1,2-Dichloroethane degradation SBML MML
dcin00632 (Undocumented) SBML MML
dcin00633 Trinitrotoluene degradation SBML MML
dcin00640 Propanoate metabolism SBML MML
dcin00641 3-Chloroacrylic acid degradation SBML MML
dcin00643 Styrene degradation SBML MML
dcin00650 Butanoate metabolism SBML MML
dcin00660 C5-Branched dibasic acid metabolism SBML MML
dcin00670 One carbon pool by folate SBML MML
dcin00680 Methane metabolism SBML MML
dcin00710 (Undocumented) SBML MML
dcin00720 (Undocumented) SBML MML
dcin00730 Thiamine metabolism SBML MML
dcin00740 Riboflavin metabolism SBML MML
dcin00750 Vitamin B6 metabolism SBML MML
dcin00760 Nicotinate and nicotinamide metabolism SBML MML
dcin00770 Pantothenate and CoA biosynthesis SBML MML
dcin00780 Biotin metabolism SBML MML
dcin00790 Folate biosynthesis SBML MML
dcin00791 Atrazine degradation SBML MML
dcin00830 Retinol metabolism SBML MML
dcin00860 Porphyrin and chlorophyll metabolism SBML MML
dcin00900 Terpenoid backbone biosynthesis SBML MML
dcin00901 (Undocumented) SBML MML
dcin00903 (Undocumented) SBML MML
dcin00904 (Undocumented) SBML MML
dcin00910 Nitrogen metabolism SBML MML
dcin00920 Sulfur metabolism SBML MML
dcin00930 Caprolactam degradation SBML MML
dcin00940 (Undocumented) SBML MML
dcin00950 (Undocumented) SBML MML
dcin00960 (Undocumented) SBML MML
dcin00970 Aminoacyl-tRNA biosynthesis SBML MML
dcin00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
dcin00982 (Undocumented) SBML MML
dcin00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.