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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ctb: Chlamydia trachomatis 434/Bu

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ctb00010 Glycolysis / Gluconeogenesis SBML MML
ctb00020 Citrate cycle (TCA cycle) SBML MML
ctb00030 Pentose phosphate pathway SBML MML
ctb00051 Fructose and mannose metabolism SBML MML
ctb00061 Fatty acid biosynthesis SBML MML
ctb00100 (Undocumented) SBML MML
ctb00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ctb00230 Purine metabolism SBML MML
ctb00240 Pyrimidine metabolism SBML MML
ctb00251 (Undocumented) SBML MML
ctb00252 (Undocumented) SBML MML
ctb00260 Glycine, serine and threonine metabolism SBML MML
ctb00271 (Undocumented) SBML MML
ctb00272 (Undocumented) SBML MML
ctb00280 Valine, leucine and isoleucine degradation SBML MML
ctb00290 Valine, leucine and isoleucine biosynthesis SBML MML
ctb00300 Lysine biosynthesis SBML MML
ctb00310 Lysine degradation SBML MML
ctb00330 Arginine and proline metabolism SBML MML
ctb00340 Histidine metabolism SBML MML
ctb00350 Tyrosine metabolism SBML MML
ctb00380 Tryptophan metabolism SBML MML
ctb00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ctb00450 Selenoamino acid metabolism SBML MML
ctb00471 D-Glutamine and D-glutamate metabolism SBML MML
ctb00500 Starch and sucrose metabolism SBML MML
ctb00530 (Undocumented) SBML MML
ctb00540 Lipopolysaccharide biosynthesis SBML MML
ctb00550 Peptidoglycan biosynthesis SBML MML
ctb00561 Glycerolipid metabolism SBML MML
ctb00564 Glycerophospholipid metabolism SBML MML
ctb00565 Ether lipid metabolism SBML MML
ctb00620 Pyruvate metabolism SBML MML
ctb00630 Glyoxylate and dicarboxylate metabolism SBML MML
ctb00632 (Undocumented) SBML MML
ctb00640 Propanoate metabolism SBML MML
ctb00650 Butanoate metabolism SBML MML
ctb00670 One carbon pool by folate SBML MML
ctb00710 (Undocumented) SBML MML
ctb00720 (Undocumented) SBML MML
ctb00730 Thiamine metabolism SBML MML
ctb00740 Riboflavin metabolism SBML MML
ctb00770 Pantothenate and CoA biosynthesis SBML MML
ctb00780 Biotin metabolism SBML MML
ctb00790 Folate biosynthesis SBML MML
ctb00791 Atrazine degradation SBML MML
ctb00860 Porphyrin and chlorophyll metabolism SBML MML
ctb00900 Terpenoid backbone biosynthesis SBML MML
ctb00920 Sulfur metabolism SBML MML
ctb00970 Aminoacyl-tRNA biosynthesis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.