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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cta: Chlamydia trachomatis A/HAR-13 (serovar A)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cta00010 Glycolysis / Gluconeogenesis SBML MML
cta00020 Citrate cycle (TCA cycle) SBML MML
cta00030 Pentose phosphate pathway SBML MML
cta00051 Fructose and mannose metabolism SBML MML
cta00061 Fatty acid biosynthesis SBML MML
cta00100 (Undocumented) SBML MML
cta00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cta00230 Purine metabolism SBML MML
cta00240 Pyrimidine metabolism SBML MML
cta00251 (Undocumented) SBML MML
cta00252 (Undocumented) SBML MML
cta00260 Glycine, serine and threonine metabolism SBML MML
cta00271 (Undocumented) SBML MML
cta00272 (Undocumented) SBML MML
cta00280 Valine, leucine and isoleucine degradation SBML MML
cta00290 Valine, leucine and isoleucine biosynthesis SBML MML
cta00300 Lysine biosynthesis SBML MML
cta00310 Lysine degradation SBML MML
cta00330 Arginine and proline metabolism SBML MML
cta00340 Histidine metabolism SBML MML
cta00350 Tyrosine metabolism SBML MML
cta00360 Phenylalanine metabolism SBML MML
cta00380 Tryptophan metabolism SBML MML
cta00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cta00401 Novobiocin biosynthesis SBML MML
cta00450 Selenoamino acid metabolism SBML MML
cta00471 D-Glutamine and D-glutamate metabolism SBML MML
cta00500 Starch and sucrose metabolism SBML MML
cta00530 (Undocumented) SBML MML
cta00540 Lipopolysaccharide biosynthesis SBML MML
cta00550 Peptidoglycan biosynthesis SBML MML
cta00561 Glycerolipid metabolism SBML MML
cta00564 Glycerophospholipid metabolism SBML MML
cta00565 Ether lipid metabolism SBML MML
cta00620 Pyruvate metabolism SBML MML
cta00630 Glyoxylate and dicarboxylate metabolism SBML MML
cta00632 (Undocumented) SBML MML
cta00640 Propanoate metabolism SBML MML
cta00650 Butanoate metabolism SBML MML
cta00670 One carbon pool by folate SBML MML
cta00710 (Undocumented) SBML MML
cta00720 (Undocumented) SBML MML
cta00730 Thiamine metabolism SBML MML
cta00740 Riboflavin metabolism SBML MML
cta00760 Nicotinate and nicotinamide metabolism SBML MML
cta00770 Pantothenate and CoA biosynthesis SBML MML
cta00780 Biotin metabolism SBML MML
cta00785 Lipoic acid metabolism SBML MML
cta00790 Folate biosynthesis SBML MML
cta00791 Atrazine degradation SBML MML
cta00860 Porphyrin and chlorophyll metabolism SBML MML
cta00900 Terpenoid backbone biosynthesis SBML MML
cta00920 Sulfur metabolism SBML MML
cta00950 (Undocumented) SBML MML
cta00970 Aminoacyl-tRNA biosynthesis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.