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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cpf: Clostridium perfringens ATCC 13124

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cpf00010 Glycolysis / Gluconeogenesis SBML MML
cpf00030 Pentose phosphate pathway SBML MML
cpf00031 (Undocumented) SBML MML
cpf00040 Pentose and glucuronate interconversions SBML MML
cpf00051 Fructose and mannose metabolism SBML MML
cpf00052 Galactose metabolism SBML MML
cpf00053 Ascorbate and aldarate metabolism SBML MML
cpf00061 Fatty acid biosynthesis SBML MML
cpf00071 Fatty acid metabolism SBML MML
cpf00100 (Undocumented) SBML MML
cpf00120 (Undocumented) SBML MML
cpf00220 (Undocumented) SBML MML
cpf00230 Purine metabolism SBML MML
cpf00240 Pyrimidine metabolism SBML MML
cpf00251 (Undocumented) SBML MML
cpf00252 (Undocumented) SBML MML
cpf00260 Glycine, serine and threonine metabolism SBML MML
cpf00271 (Undocumented) SBML MML
cpf00272 (Undocumented) SBML MML
cpf00280 Valine, leucine and isoleucine degradation SBML MML
cpf00290 Valine, leucine and isoleucine biosynthesis SBML MML
cpf00300 Lysine biosynthesis SBML MML
cpf00310 Lysine degradation SBML MML
cpf00330 Arginine and proline metabolism SBML MML
cpf00340 Histidine metabolism SBML MML
cpf00350 Tyrosine metabolism SBML MML
cpf00360 Phenylalanine metabolism SBML MML
cpf00380 Tryptophan metabolism SBML MML
cpf00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cpf00401 Novobiocin biosynthesis SBML MML
cpf00410 beta-Alanine metabolism SBML MML
cpf00430 Taurine and hypotaurine metabolism SBML MML
cpf00450 Selenoamino acid metabolism SBML MML
cpf00460 (Undocumented) SBML MML
cpf00471 D-Glutamine and D-glutamate metabolism SBML MML
cpf00473 D-Alanine metabolism SBML MML
cpf00480 Glutathione metabolism SBML MML
cpf00500 Starch and sucrose metabolism SBML MML
cpf00520 Amino sugar and nucleotide sugar metabolism SBML MML
cpf00521 Streptomycin biosynthesis SBML MML
cpf00523 Polyketide sugar unit biosynthesis SBML MML
cpf00530 (Undocumented) SBML MML
cpf00550 Peptidoglycan biosynthesis SBML MML
cpf00561 Glycerolipid metabolism SBML MML
cpf00562 Inositol phosphate metabolism SBML MML
cpf00564 Glycerophospholipid metabolism SBML MML
cpf00565 Ether lipid metabolism SBML MML
cpf00590 Arachidonic acid metabolism SBML MML
cpf00600 Sphingolipid metabolism SBML MML
cpf00620 Pyruvate metabolism SBML MML
cpf00624 1- and 2-Methylnaphthalene degradation SBML MML
cpf00630 Glyoxylate and dicarboxylate metabolism SBML MML
cpf00632 (Undocumented) SBML MML
cpf00640 Propanoate metabolism SBML MML
cpf00641 3-Chloroacrylic acid degradation SBML MML
cpf00650 Butanoate metabolism SBML MML
cpf00670 One carbon pool by folate SBML MML
cpf00710 (Undocumented) SBML MML
cpf00730 Thiamine metabolism SBML MML
cpf00740 Riboflavin metabolism SBML MML
cpf00750 Vitamin B6 metabolism SBML MML
cpf00760 Nicotinate and nicotinamide metabolism SBML MML
cpf00770 Pantothenate and CoA biosynthesis SBML MML
cpf00780 Biotin metabolism SBML MML
cpf00790 Folate biosynthesis SBML MML
cpf00860 Porphyrin and chlorophyll metabolism SBML MML
cpf00900 Terpenoid backbone biosynthesis SBML MML
cpf00910 Nitrogen metabolism SBML MML
cpf00920 Sulfur metabolism SBML MML
cpf00970 Aminoacyl-tRNA biosynthesis SBML MML
cpf00982 (Undocumented) SBML MML
cpf00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.