This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cpa: Chlamydophila pneumoniae AR39

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cpa00010 Glycolysis / Gluconeogenesis SBML MML
cpa00020 Citrate cycle (TCA cycle) SBML MML
cpa00030 Pentose phosphate pathway SBML MML
cpa00051 Fructose and mannose metabolism SBML MML
cpa00061 Fatty acid biosynthesis SBML MML
cpa00100 (Undocumented) SBML MML
cpa00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cpa00230 Purine metabolism SBML MML
cpa00240 Pyrimidine metabolism SBML MML
cpa00251 (Undocumented) SBML MML
cpa00252 (Undocumented) SBML MML
cpa00260 Glycine, serine and threonine metabolism SBML MML
cpa00271 (Undocumented) SBML MML
cpa00272 (Undocumented) SBML MML
cpa00280 Valine, leucine and isoleucine degradation SBML MML
cpa00290 Valine, leucine and isoleucine biosynthesis SBML MML
cpa00300 Lysine biosynthesis SBML MML
cpa00310 Lysine degradation SBML MML
cpa00330 Arginine and proline metabolism SBML MML
cpa00340 Histidine metabolism SBML MML
cpa00350 Tyrosine metabolism SBML MML
cpa00380 Tryptophan metabolism SBML MML
cpa00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cpa00450 Selenoamino acid metabolism SBML MML
cpa00471 D-Glutamine and D-glutamate metabolism SBML MML
cpa00500 Starch and sucrose metabolism SBML MML
cpa00530 (Undocumented) SBML MML
cpa00540 Lipopolysaccharide biosynthesis SBML MML
cpa00550 Peptidoglycan biosynthesis SBML MML
cpa00561 Glycerolipid metabolism SBML MML
cpa00564 Glycerophospholipid metabolism SBML MML
cpa00620 Pyruvate metabolism SBML MML
cpa00630 Glyoxylate and dicarboxylate metabolism SBML MML
cpa00632 (Undocumented) SBML MML
cpa00640 Propanoate metabolism SBML MML
cpa00650 Butanoate metabolism SBML MML
cpa00670 One carbon pool by folate SBML MML
cpa00710 (Undocumented) SBML MML
cpa00720 (Undocumented) SBML MML
cpa00730 Thiamine metabolism SBML MML
cpa00740 Riboflavin metabolism SBML MML
cpa00760 Nicotinate and nicotinamide metabolism SBML MML
cpa00770 Pantothenate and CoA biosynthesis SBML MML
cpa00780 Biotin metabolism SBML MML
cpa00785 Lipoic acid metabolism SBML MML
cpa00790 Folate biosynthesis SBML MML
cpa00860 Porphyrin and chlorophyll metabolism SBML MML
cpa00900 Terpenoid backbone biosynthesis SBML MML
cpa00920 Sulfur metabolism SBML MML
cpa00970 Aminoacyl-tRNA biosynthesis SBML MML
cpa00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.