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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cjk: Corynebacterium jeikeium

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cjk00010 Glycolysis / Gluconeogenesis SBML MML
cjk00020 Citrate cycle (TCA cycle) SBML MML
cjk00030 Pentose phosphate pathway SBML MML
cjk00040 Pentose and glucuronate interconversions SBML MML
cjk00051 Fructose and mannose metabolism SBML MML
cjk00052 Galactose metabolism SBML MML
cjk00053 Ascorbate and aldarate metabolism SBML MML
cjk00061 Fatty acid biosynthesis SBML MML
cjk00062 Fatty acid elongation in mitochondria SBML MML
cjk00071 Fatty acid metabolism SBML MML
cjk00072 Synthesis and degradation of ketone bodies SBML MML
cjk00100 (Undocumented) SBML MML
cjk00120 (Undocumented) SBML MML
cjk00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cjk00220 (Undocumented) SBML MML
cjk00230 Purine metabolism SBML MML
cjk00240 Pyrimidine metabolism SBML MML
cjk00251 (Undocumented) SBML MML
cjk00252 (Undocumented) SBML MML
cjk00260 Glycine, serine and threonine metabolism SBML MML
cjk00271 (Undocumented) SBML MML
cjk00272 (Undocumented) SBML MML
cjk00280 Valine, leucine and isoleucine degradation SBML MML
cjk00281 Geraniol degradation SBML MML
cjk00290 Valine, leucine and isoleucine biosynthesis SBML MML
cjk00300 Lysine biosynthesis SBML MML
cjk00310 Lysine degradation SBML MML
cjk00330 Arginine and proline metabolism SBML MML
cjk00340 Histidine metabolism SBML MML
cjk00350 Tyrosine metabolism SBML MML
cjk00360 Phenylalanine metabolism SBML MML
cjk00361 gamma-Hexachlorocyclohexane degradation SBML MML
cjk00380 Tryptophan metabolism SBML MML
cjk00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cjk00401 Novobiocin biosynthesis SBML MML
cjk00410 beta-Alanine metabolism SBML MML
cjk00430 Taurine and hypotaurine metabolism SBML MML
cjk00450 Selenoamino acid metabolism SBML MML
cjk00460 (Undocumented) SBML MML
cjk00471 D-Glutamine and D-glutamate metabolism SBML MML
cjk00473 D-Alanine metabolism SBML MML
cjk00480 Glutathione metabolism SBML MML
cjk00500 Starch and sucrose metabolism SBML MML
cjk00520 Amino sugar and nucleotide sugar metabolism SBML MML
cjk00521 Streptomycin biosynthesis SBML MML
cjk00523 Polyketide sugar unit biosynthesis SBML MML
cjk00530 (Undocumented) SBML MML
cjk00550 Peptidoglycan biosynthesis SBML MML
cjk00561 Glycerolipid metabolism SBML MML
cjk00562 Inositol phosphate metabolism SBML MML
cjk00564 Glycerophospholipid metabolism SBML MML
cjk00592 alpha-Linolenic acid metabolism SBML MML
cjk00620 Pyruvate metabolism SBML MML
cjk00624 1- and 2-Methylnaphthalene degradation SBML MML
cjk00626 Naphthalene and anthracene degradation SBML MML
cjk00630 Glyoxylate and dicarboxylate metabolism SBML MML
cjk00632 (Undocumented) SBML MML
cjk00640 Propanoate metabolism SBML MML
cjk00641 3-Chloroacrylic acid degradation SBML MML
cjk00643 Styrene degradation SBML MML
cjk00650 Butanoate metabolism SBML MML
cjk00660 C5-Branched dibasic acid metabolism SBML MML
cjk00670 One carbon pool by folate SBML MML
cjk00680 Methane metabolism SBML MML
cjk00710 (Undocumented) SBML MML
cjk00720 (Undocumented) SBML MML
cjk00730 Thiamine metabolism SBML MML
cjk00740 Riboflavin metabolism SBML MML
cjk00750 Vitamin B6 metabolism SBML MML
cjk00760 Nicotinate and nicotinamide metabolism SBML MML
cjk00770 Pantothenate and CoA biosynthesis SBML MML
cjk00780 Biotin metabolism SBML MML
cjk00785 Lipoic acid metabolism SBML MML
cjk00790 Folate biosynthesis SBML MML
cjk00860 Porphyrin and chlorophyll metabolism SBML MML
cjk00900 Terpenoid backbone biosynthesis SBML MML
cjk00903 (Undocumented) SBML MML
cjk00910 Nitrogen metabolism SBML MML
cjk00920 Sulfur metabolism SBML MML
cjk00930 Caprolactam degradation SBML MML
cjk00940 (Undocumented) SBML MML
cjk00970 Aminoacyl-tRNA biosynthesis SBML MML
cjk00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.