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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cjj: Campylobacter jejuni 81-176

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cjj00010 Glycolysis / Gluconeogenesis SBML MML
cjj00020 Citrate cycle (TCA cycle) SBML MML
cjj00030 Pentose phosphate pathway SBML MML
cjj00040 Pentose and glucuronate interconversions SBML MML
cjj00051 Fructose and mannose metabolism SBML MML
cjj00052 Galactose metabolism SBML MML
cjj00061 Fatty acid biosynthesis SBML MML
cjj00100 (Undocumented) SBML MML
cjj00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cjj00220 (Undocumented) SBML MML
cjj00230 Purine metabolism SBML MML
cjj00240 Pyrimidine metabolism SBML MML
cjj00251 (Undocumented) SBML MML
cjj00252 (Undocumented) SBML MML
cjj00260 Glycine, serine and threonine metabolism SBML MML
cjj00271 (Undocumented) SBML MML
cjj00272 (Undocumented) SBML MML
cjj00280 Valine, leucine and isoleucine degradation SBML MML
cjj00290 Valine, leucine and isoleucine biosynthesis SBML MML
cjj00300 Lysine biosynthesis SBML MML
cjj00310 Lysine degradation SBML MML
cjj00330 Arginine and proline metabolism SBML MML
cjj00340 Histidine metabolism SBML MML
cjj00350 Tyrosine metabolism SBML MML
cjj00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
cjj00360 Phenylalanine metabolism SBML MML
cjj00362 (Undocumented) SBML MML
cjj00380 Tryptophan metabolism SBML MML
cjj00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cjj00401 Novobiocin biosynthesis SBML MML
cjj00410 beta-Alanine metabolism SBML MML
cjj00430 Taurine and hypotaurine metabolism SBML MML
cjj00450 Selenoamino acid metabolism SBML MML
cjj00460 (Undocumented) SBML MML
cjj00471 D-Glutamine and D-glutamate metabolism SBML MML
cjj00473 D-Alanine metabolism SBML MML
cjj00480 Glutathione metabolism SBML MML
cjj00500 Starch and sucrose metabolism SBML MML
cjj00520 Amino sugar and nucleotide sugar metabolism SBML MML
cjj00521 Streptomycin biosynthesis SBML MML
cjj00523 Polyketide sugar unit biosynthesis SBML MML
cjj00530 (Undocumented) SBML MML
cjj00540 Lipopolysaccharide biosynthesis SBML MML
cjj00550 Peptidoglycan biosynthesis SBML MML
cjj00561 Glycerolipid metabolism SBML MML
cjj00562 Inositol phosphate metabolism SBML MML
cjj00564 Glycerophospholipid metabolism SBML MML
cjj00620 Pyruvate metabolism SBML MML
cjj00628 Fluorene degradation SBML MML
cjj00630 Glyoxylate and dicarboxylate metabolism SBML MML
cjj00632 (Undocumented) SBML MML
cjj00640 Propanoate metabolism SBML MML
cjj00650 Butanoate metabolism SBML MML
cjj00660 C5-Branched dibasic acid metabolism SBML MML
cjj00670 One carbon pool by folate SBML MML
cjj00680 Methane metabolism SBML MML
cjj00710 (Undocumented) SBML MML
cjj00720 (Undocumented) SBML MML
cjj00730 Thiamine metabolism SBML MML
cjj00740 Riboflavin metabolism SBML MML
cjj00750 Vitamin B6 metabolism SBML MML
cjj00760 Nicotinate and nicotinamide metabolism SBML MML
cjj00770 Pantothenate and CoA biosynthesis SBML MML
cjj00780 Biotin metabolism SBML MML
cjj00790 Folate biosynthesis SBML MML
cjj00860 Porphyrin and chlorophyll metabolism SBML MML
cjj00900 Terpenoid backbone biosynthesis SBML MML
cjj00910 Nitrogen metabolism SBML MML
cjj00920 Sulfur metabolism SBML MML
cjj00930 Caprolactam degradation SBML MML
cjj00940 (Undocumented) SBML MML
cjj00950 (Undocumented) SBML MML
cjj00970 Aminoacyl-tRNA biosynthesis SBML MML
cjj00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.