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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cgr: Candida glabrata

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cgr00010 Glycolysis / Gluconeogenesis SBML MML
cgr00020 Citrate cycle (TCA cycle) SBML MML
cgr00030 Pentose phosphate pathway SBML MML
cgr00040 Pentose and glucuronate interconversions SBML MML
cgr00051 Fructose and mannose metabolism SBML MML
cgr00052 Galactose metabolism SBML MML
cgr00061 Fatty acid biosynthesis SBML MML
cgr00062 Fatty acid elongation in mitochondria SBML MML
cgr00071 Fatty acid metabolism SBML MML
cgr00072 Synthesis and degradation of ketone bodies SBML MML
cgr00100 (Undocumented) SBML MML
cgr00120 (Undocumented) SBML MML
cgr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cgr00220 (Undocumented) SBML MML
cgr00230 Purine metabolism SBML MML
cgr00240 Pyrimidine metabolism SBML MML
cgr00251 (Undocumented) SBML MML
cgr00252 (Undocumented) SBML MML
cgr00260 Glycine, serine and threonine metabolism SBML MML
cgr00271 (Undocumented) SBML MML
cgr00272 (Undocumented) SBML MML
cgr00280 Valine, leucine and isoleucine degradation SBML MML
cgr00281 Geraniol degradation SBML MML
cgr00290 Valine, leucine and isoleucine biosynthesis SBML MML
cgr00300 Lysine biosynthesis SBML MML
cgr00310 Lysine degradation SBML MML
cgr00330 Arginine and proline metabolism SBML MML
cgr00340 Histidine metabolism SBML MML
cgr00350 Tyrosine metabolism SBML MML
cgr00360 Phenylalanine metabolism SBML MML
cgr00361 gamma-Hexachlorocyclohexane degradation SBML MML
cgr00362 (Undocumented) SBML MML
cgr00364 Fluorobenzoate degradation SBML MML
cgr00380 Tryptophan metabolism SBML MML
cgr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cgr00401 Novobiocin biosynthesis SBML MML
cgr00410 beta-Alanine metabolism SBML MML
cgr00440 Phosphonate and phosphinate metabolism SBML MML
cgr00450 Selenoamino acid metabolism SBML MML
cgr00460 (Undocumented) SBML MML
cgr00480 Glutathione metabolism SBML MML
cgr00500 Starch and sucrose metabolism SBML MML
cgr00510 (Undocumented) SBML MML
cgr00521 Streptomycin biosynthesis SBML MML
cgr00530 (Undocumented) SBML MML
cgr00550 Peptidoglycan biosynthesis SBML MML
cgr00561 Glycerolipid metabolism SBML MML
cgr00562 Inositol phosphate metabolism SBML MML
cgr00564 Glycerophospholipid metabolism SBML MML
cgr00565 Ether lipid metabolism SBML MML
cgr00590 Arachidonic acid metabolism SBML MML
cgr00592 alpha-Linolenic acid metabolism SBML MML
cgr00600 Sphingolipid metabolism SBML MML
cgr00620 Pyruvate metabolism SBML MML
cgr00624 1- and 2-Methylnaphthalene degradation SBML MML
cgr00627 1,4-Dichlorobenzene degradation SBML MML
cgr00630 Glyoxylate and dicarboxylate metabolism SBML MML
cgr00632 (Undocumented) SBML MML
cgr00640 Propanoate metabolism SBML MML
cgr00641 3-Chloroacrylic acid degradation SBML MML
cgr00642 Ethylbenzene degradation SBML MML
cgr00650 Butanoate metabolism SBML MML
cgr00660 C5-Branched dibasic acid metabolism SBML MML
cgr00670 One carbon pool by folate SBML MML
cgr00680 Methane metabolism SBML MML
cgr00710 (Undocumented) SBML MML
cgr00720 (Undocumented) SBML MML
cgr00730 Thiamine metabolism SBML MML
cgr00740 Riboflavin metabolism SBML MML
cgr00750 Vitamin B6 metabolism SBML MML
cgr00760 Nicotinate and nicotinamide metabolism SBML MML
cgr00770 Pantothenate and CoA biosynthesis SBML MML
cgr00785 Lipoic acid metabolism SBML MML
cgr00790 Folate biosynthesis SBML MML
cgr00860 Porphyrin and chlorophyll metabolism SBML MML
cgr00900 Terpenoid backbone biosynthesis SBML MML
cgr00903 (Undocumented) SBML MML
cgr00910 Nitrogen metabolism SBML MML
cgr00920 Sulfur metabolism SBML MML
cgr00930 Caprolactam degradation SBML MML
cgr00940 (Undocumented) SBML MML
cgr00960 (Undocumented) SBML MML
cgr00970 Aminoacyl-tRNA biosynthesis SBML MML
cgr00982 (Undocumented) SBML MML
cgr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.