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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cca: Chlamydophila caviae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cca00010 Glycolysis / Gluconeogenesis SBML MML
cca00020 Citrate cycle (TCA cycle) SBML MML
cca00030 Pentose phosphate pathway SBML MML
cca00051 Fructose and mannose metabolism SBML MML
cca00061 Fatty acid biosynthesis SBML MML
cca00100 (Undocumented) SBML MML
cca00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cca00230 Purine metabolism SBML MML
cca00240 Pyrimidine metabolism SBML MML
cca00251 (Undocumented) SBML MML
cca00252 (Undocumented) SBML MML
cca00260 Glycine, serine and threonine metabolism SBML MML
cca00271 (Undocumented) SBML MML
cca00272 (Undocumented) SBML MML
cca00280 Valine, leucine and isoleucine degradation SBML MML
cca00290 Valine, leucine and isoleucine biosynthesis SBML MML
cca00300 Lysine biosynthesis SBML MML
cca00310 Lysine degradation SBML MML
cca00330 Arginine and proline metabolism SBML MML
cca00340 Histidine metabolism SBML MML
cca00350 Tyrosine metabolism SBML MML
cca00380 Tryptophan metabolism SBML MML
cca00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cca00450 Selenoamino acid metabolism SBML MML
cca00471 D-Glutamine and D-glutamate metabolism SBML MML
cca00500 Starch and sucrose metabolism SBML MML
cca00530 (Undocumented) SBML MML
cca00540 Lipopolysaccharide biosynthesis SBML MML
cca00550 Peptidoglycan biosynthesis SBML MML
cca00561 Glycerolipid metabolism SBML MML
cca00564 Glycerophospholipid metabolism SBML MML
cca00620 Pyruvate metabolism SBML MML
cca00630 Glyoxylate and dicarboxylate metabolism SBML MML
cca00632 (Undocumented) SBML MML
cca00640 Propanoate metabolism SBML MML
cca00650 Butanoate metabolism SBML MML
cca00670 One carbon pool by folate SBML MML
cca00710 (Undocumented) SBML MML
cca00720 (Undocumented) SBML MML
cca00730 Thiamine metabolism SBML MML
cca00740 Riboflavin metabolism SBML MML
cca00760 Nicotinate and nicotinamide metabolism SBML MML
cca00770 Pantothenate and CoA biosynthesis SBML MML
cca00780 Biotin metabolism SBML MML
cca00785 Lipoic acid metabolism SBML MML
cca00790 Folate biosynthesis SBML MML
cca00860 Porphyrin and chlorophyll metabolism SBML MML
cca00900 Terpenoid backbone biosynthesis SBML MML
cca00920 Sulfur metabolism SBML MML
cca00970 Aminoacyl-tRNA biosynthesis SBML MML
cca00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.