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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cbu: Coxiella burnetii RSA 493

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cbu00010 Glycolysis / Gluconeogenesis SBML MML
cbu00020 Citrate cycle (TCA cycle) SBML MML
cbu00030 Pentose phosphate pathway SBML MML
cbu00031 (Undocumented) SBML MML
cbu00040 Pentose and glucuronate interconversions SBML MML
cbu00051 Fructose and mannose metabolism SBML MML
cbu00052 Galactose metabolism SBML MML
cbu00061 Fatty acid biosynthesis SBML MML
cbu00062 Fatty acid elongation in mitochondria SBML MML
cbu00071 Fatty acid metabolism SBML MML
cbu00072 Synthesis and degradation of ketone bodies SBML MML
cbu00100 (Undocumented) SBML MML
cbu00120 (Undocumented) SBML MML
cbu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cbu00220 (Undocumented) SBML MML
cbu00230 Purine metabolism SBML MML
cbu00240 Pyrimidine metabolism SBML MML
cbu00251 (Undocumented) SBML MML
cbu00252 (Undocumented) SBML MML
cbu00260 Glycine, serine and threonine metabolism SBML MML
cbu00271 (Undocumented) SBML MML
cbu00272 (Undocumented) SBML MML
cbu00280 Valine, leucine and isoleucine degradation SBML MML
cbu00281 Geraniol degradation SBML MML
cbu00290 Valine, leucine and isoleucine biosynthesis SBML MML
cbu00300 Lysine biosynthesis SBML MML
cbu00310 Lysine degradation SBML MML
cbu00330 Arginine and proline metabolism SBML MML
cbu00340 Histidine metabolism SBML MML
cbu00350 Tyrosine metabolism SBML MML
cbu00361 gamma-Hexachlorocyclohexane degradation SBML MML
cbu00362 (Undocumented) SBML MML
cbu00380 Tryptophan metabolism SBML MML
cbu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cbu00410 beta-Alanine metabolism SBML MML
cbu00440 Phosphonate and phosphinate metabolism SBML MML
cbu00450 Selenoamino acid metabolism SBML MML
cbu00471 D-Glutamine and D-glutamate metabolism SBML MML
cbu00473 D-Alanine metabolism SBML MML
cbu00480 Glutathione metabolism SBML MML
cbu00500 Starch and sucrose metabolism SBML MML
cbu00520 Amino sugar and nucleotide sugar metabolism SBML MML
cbu00521 Streptomycin biosynthesis SBML MML
cbu00523 Polyketide sugar unit biosynthesis SBML MML
cbu00530 (Undocumented) SBML MML
cbu00540 Lipopolysaccharide biosynthesis SBML MML
cbu00550 Peptidoglycan biosynthesis SBML MML
cbu00562 Inositol phosphate metabolism SBML MML
cbu00564 Glycerophospholipid metabolism SBML MML
cbu00592 alpha-Linolenic acid metabolism SBML MML
cbu00620 Pyruvate metabolism SBML MML
cbu00626 Naphthalene and anthracene degradation SBML MML
cbu00630 Glyoxylate and dicarboxylate metabolism SBML MML
cbu00632 (Undocumented) SBML MML
cbu00640 Propanoate metabolism SBML MML
cbu00641 3-Chloroacrylic acid degradation SBML MML
cbu00650 Butanoate metabolism SBML MML
cbu00660 C5-Branched dibasic acid metabolism SBML MML
cbu00670 One carbon pool by folate SBML MML
cbu00680 Methane metabolism SBML MML
cbu00710 (Undocumented) SBML MML
cbu00720 (Undocumented) SBML MML
cbu00730 Thiamine metabolism SBML MML
cbu00740 Riboflavin metabolism SBML MML
cbu00750 Vitamin B6 metabolism SBML MML
cbu00760 Nicotinate and nicotinamide metabolism SBML MML
cbu00770 Pantothenate and CoA biosynthesis SBML MML
cbu00780 Biotin metabolism SBML MML
cbu00785 Lipoic acid metabolism SBML MML
cbu00790 Folate biosynthesis SBML MML
cbu00860 Porphyrin and chlorophyll metabolism SBML MML
cbu00900 Terpenoid backbone biosynthesis SBML MML
cbu00903 (Undocumented) SBML MML
cbu00910 Nitrogen metabolism SBML MML
cbu00920 Sulfur metabolism SBML MML
cbu00930 Caprolactam degradation SBML MML
cbu00970 Aminoacyl-tRNA biosynthesis SBML MML
cbu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.