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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism btr: Bartonella tribocorum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
btr00010 Glycolysis / Gluconeogenesis SBML MML
btr00020 Citrate cycle (TCA cycle) SBML MML
btr00030 Pentose phosphate pathway SBML MML
btr00040 Pentose and glucuronate interconversions SBML MML
btr00051 Fructose and mannose metabolism SBML MML
btr00052 Galactose metabolism SBML MML
btr00061 Fatty acid biosynthesis SBML MML
btr00071 Fatty acid metabolism SBML MML
btr00100 (Undocumented) SBML MML
btr00120 (Undocumented) SBML MML
btr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
btr00220 (Undocumented) SBML MML
btr00230 Purine metabolism SBML MML
btr00240 Pyrimidine metabolism SBML MML
btr00251 (Undocumented) SBML MML
btr00252 (Undocumented) SBML MML
btr00260 Glycine, serine and threonine metabolism SBML MML
btr00271 (Undocumented) SBML MML
btr00272 (Undocumented) SBML MML
btr00280 Valine, leucine and isoleucine degradation SBML MML
btr00290 Valine, leucine and isoleucine biosynthesis SBML MML
btr00300 Lysine biosynthesis SBML MML
btr00310 Lysine degradation SBML MML
btr00330 Arginine and proline metabolism SBML MML
btr00340 Histidine metabolism SBML MML
btr00350 Tyrosine metabolism SBML MML
btr00360 Phenylalanine metabolism SBML MML
btr00362 (Undocumented) SBML MML
btr00380 Tryptophan metabolism SBML MML
btr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
btr00401 Novobiocin biosynthesis SBML MML
btr00410 beta-Alanine metabolism SBML MML
btr00450 Selenoamino acid metabolism SBML MML
btr00460 (Undocumented) SBML MML
btr00471 D-Glutamine and D-glutamate metabolism SBML MML
btr00473 D-Alanine metabolism SBML MML
btr00480 Glutathione metabolism SBML MML
btr00500 Starch and sucrose metabolism SBML MML
btr00521 Streptomycin biosynthesis SBML MML
btr00530 (Undocumented) SBML MML
btr00540 Lipopolysaccharide biosynthesis SBML MML
btr00550 Peptidoglycan biosynthesis SBML MML
btr00561 Glycerolipid metabolism SBML MML
btr00562 Inositol phosphate metabolism SBML MML
btr00564 Glycerophospholipid metabolism SBML MML
btr00620 Pyruvate metabolism SBML MML
btr00624 1- and 2-Methylnaphthalene degradation SBML MML
btr00626 Naphthalene and anthracene degradation SBML MML
btr00628 Fluorene degradation SBML MML
btr00630 Glyoxylate and dicarboxylate metabolism SBML MML
btr00632 (Undocumented) SBML MML
btr00640 Propanoate metabolism SBML MML
btr00641 3-Chloroacrylic acid degradation SBML MML
btr00642 Ethylbenzene degradation SBML MML
btr00650 Butanoate metabolism SBML MML
btr00660 C5-Branched dibasic acid metabolism SBML MML
btr00670 One carbon pool by folate SBML MML
btr00710 (Undocumented) SBML MML
btr00720 (Undocumented) SBML MML
btr00730 Thiamine metabolism SBML MML
btr00740 Riboflavin metabolism SBML MML
btr00750 Vitamin B6 metabolism SBML MML
btr00760 Nicotinate and nicotinamide metabolism SBML MML
btr00770 Pantothenate and CoA biosynthesis SBML MML
btr00780 Biotin metabolism SBML MML
btr00785 Lipoic acid metabolism SBML MML
btr00790 Folate biosynthesis SBML MML
btr00860 Porphyrin and chlorophyll metabolism SBML MML
btr00900 Terpenoid backbone biosynthesis SBML MML
btr00903 (Undocumented) SBML MML
btr00910 Nitrogen metabolism SBML MML
btr00930 Caprolactam degradation SBML MML
btr00940 (Undocumented) SBML MML
btr00950 (Undocumented) SBML MML
btr00960 (Undocumented) SBML MML
btr00970 Aminoacyl-tRNA biosynthesis SBML MML
btr00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
btr00982 (Undocumented) SBML MML
btr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.