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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bfl: Candidatus Blochmannia floridanus

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bfl00010 Glycolysis / Gluconeogenesis SBML MML
bfl00020 Citrate cycle (TCA cycle) SBML MML
bfl00030 Pentose phosphate pathway SBML MML
bfl00051 Fructose and mannose metabolism SBML MML
bfl00052 Galactose metabolism SBML MML
bfl00061 Fatty acid biosynthesis SBML MML
bfl00100 (Undocumented) SBML MML
bfl00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bfl00220 (Undocumented) SBML MML
bfl00230 Purine metabolism SBML MML
bfl00240 Pyrimidine metabolism SBML MML
bfl00251 (Undocumented) SBML MML
bfl00252 (Undocumented) SBML MML
bfl00260 Glycine, serine and threonine metabolism SBML MML
bfl00271 (Undocumented) SBML MML
bfl00272 (Undocumented) SBML MML
bfl00280 Valine, leucine and isoleucine degradation SBML MML
bfl00290 Valine, leucine and isoleucine biosynthesis SBML MML
bfl00300 Lysine biosynthesis SBML MML
bfl00310 Lysine degradation SBML MML
bfl00330 Arginine and proline metabolism SBML MML
bfl00340 Histidine metabolism SBML MML
bfl00350 Tyrosine metabolism SBML MML
bfl00360 Phenylalanine metabolism SBML MML
bfl00380 Tryptophan metabolism SBML MML
bfl00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bfl00401 Novobiocin biosynthesis SBML MML
bfl00450 Selenoamino acid metabolism SBML MML
bfl00471 D-Glutamine and D-glutamate metabolism SBML MML
bfl00500 Starch and sucrose metabolism SBML MML
bfl00521 Streptomycin biosynthesis SBML MML
bfl00530 (Undocumented) SBML MML
bfl00540 Lipopolysaccharide biosynthesis SBML MML
bfl00550 Peptidoglycan biosynthesis SBML MML
bfl00562 Inositol phosphate metabolism SBML MML
bfl00564 Glycerophospholipid metabolism SBML MML
bfl00620 Pyruvate metabolism SBML MML
bfl00630 Glyoxylate and dicarboxylate metabolism SBML MML
bfl00640 Propanoate metabolism SBML MML
bfl00650 Butanoate metabolism SBML MML
bfl00660 C5-Branched dibasic acid metabolism SBML MML
bfl00670 One carbon pool by folate SBML MML
bfl00680 Methane metabolism SBML MML
bfl00710 (Undocumented) SBML MML
bfl00720 (Undocumented) SBML MML
bfl00730 Thiamine metabolism SBML MML
bfl00740 Riboflavin metabolism SBML MML
bfl00750 Vitamin B6 metabolism SBML MML
bfl00770 Pantothenate and CoA biosynthesis SBML MML
bfl00780 Biotin metabolism SBML MML
bfl00785 Lipoic acid metabolism SBML MML
bfl00790 Folate biosynthesis SBML MML
bfl00860 Porphyrin and chlorophyll metabolism SBML MML
bfl00900 Terpenoid backbone biosynthesis SBML MML
bfl00910 Nitrogen metabolism SBML MML
bfl00920 Sulfur metabolism SBML MML
bfl00970 Aminoacyl-tRNA biosynthesis SBML MML
bfl00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.