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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bbu: Borrelia burgdorferi

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bbu00010 Glycolysis / Gluconeogenesis SBML MML
bbu00030 Pentose phosphate pathway SBML MML
bbu00051 Fructose and mannose metabolism SBML MML
bbu00100 (Undocumented) SBML MML
bbu00220 (Undocumented) SBML MML
bbu00230 Purine metabolism SBML MML
bbu00240 Pyrimidine metabolism SBML MML
bbu00251 (Undocumented) SBML MML
bbu00252 (Undocumented) SBML MML
bbu00260 Glycine, serine and threonine metabolism SBML MML
bbu00271 (Undocumented) SBML MML
bbu00272 (Undocumented) SBML MML
bbu00290 Valine, leucine and isoleucine biosynthesis SBML MML
bbu00300 Lysine biosynthesis SBML MML
bbu00330 Arginine and proline metabolism SBML MML
bbu00340 Histidine metabolism SBML MML
bbu00380 Tryptophan metabolism SBML MML
bbu00450 Selenoamino acid metabolism SBML MML
bbu00500 Starch and sucrose metabolism SBML MML
bbu00530 (Undocumented) SBML MML
bbu00550 Peptidoglycan biosynthesis SBML MML
bbu00561 Glycerolipid metabolism SBML MML
bbu00564 Glycerophospholipid metabolism SBML MML
bbu00620 Pyruvate metabolism SBML MML
bbu00630 Glyoxylate and dicarboxylate metabolism SBML MML
bbu00640 Propanoate metabolism SBML MML
bbu00670 One carbon pool by folate SBML MML
bbu00710 (Undocumented) SBML MML
bbu00730 Thiamine metabolism SBML MML
bbu00760 Nicotinate and nicotinamide metabolism SBML MML
bbu00770 Pantothenate and CoA biosynthesis SBML MML
bbu00900 Terpenoid backbone biosynthesis SBML MML
bbu00970 Aminoacyl-tRNA biosynthesis SBML MML
bbu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.