This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism asu: Actinobacillus succinogenes

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
asu00010 Glycolysis / Gluconeogenesis SBML MML
asu00020 Citrate cycle (TCA cycle) SBML MML
asu00030 Pentose phosphate pathway SBML MML
asu00040 Pentose and glucuronate interconversions SBML MML
asu00051 Fructose and mannose metabolism SBML MML
asu00052 Galactose metabolism SBML MML
asu00053 Ascorbate and aldarate metabolism SBML MML
asu00061 Fatty acid biosynthesis SBML MML
asu00071 Fatty acid metabolism SBML MML
asu00100 (Undocumented) SBML MML
asu00120 (Undocumented) SBML MML
asu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
asu00220 (Undocumented) SBML MML
asu00230 Purine metabolism SBML MML
asu00240 Pyrimidine metabolism SBML MML
asu00251 (Undocumented) SBML MML
asu00252 (Undocumented) SBML MML
asu00260 Glycine, serine and threonine metabolism SBML MML
asu00271 (Undocumented) SBML MML
asu00272 (Undocumented) SBML MML
asu00280 Valine, leucine and isoleucine degradation SBML MML
asu00290 Valine, leucine and isoleucine biosynthesis SBML MML
asu00300 Lysine biosynthesis SBML MML
asu00310 Lysine degradation SBML MML
asu00330 Arginine and proline metabolism SBML MML
asu00340 Histidine metabolism SBML MML
asu00350 Tyrosine metabolism SBML MML
asu00360 Phenylalanine metabolism SBML MML
asu00362 (Undocumented) SBML MML
asu00380 Tryptophan metabolism SBML MML
asu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
asu00401 Novobiocin biosynthesis SBML MML
asu00410 beta-Alanine metabolism SBML MML
asu00430 Taurine and hypotaurine metabolism SBML MML
asu00450 Selenoamino acid metabolism SBML MML
asu00460 (Undocumented) SBML MML
asu00471 D-Glutamine and D-glutamate metabolism SBML MML
asu00473 D-Alanine metabolism SBML MML
asu00480 Glutathione metabolism SBML MML
asu00500 Starch and sucrose metabolism SBML MML
asu00520 Amino sugar and nucleotide sugar metabolism SBML MML
asu00521 Streptomycin biosynthesis SBML MML
asu00523 Polyketide sugar unit biosynthesis SBML MML
asu00530 (Undocumented) SBML MML
asu00540 Lipopolysaccharide biosynthesis SBML MML
asu00550 Peptidoglycan biosynthesis SBML MML
asu00561 Glycerolipid metabolism SBML MML
asu00562 Inositol phosphate metabolism SBML MML
asu00564 Glycerophospholipid metabolism SBML MML
asu00620 Pyruvate metabolism SBML MML
asu00624 1- and 2-Methylnaphthalene degradation SBML MML
asu00630 Glyoxylate and dicarboxylate metabolism SBML MML
asu00632 (Undocumented) SBML MML
asu00633 Trinitrotoluene degradation SBML MML
asu00640 Propanoate metabolism SBML MML
asu00641 3-Chloroacrylic acid degradation SBML MML
asu00650 Butanoate metabolism SBML MML
asu00660 C5-Branched dibasic acid metabolism SBML MML
asu00670 One carbon pool by folate SBML MML
asu00680 Methane metabolism SBML MML
asu00710 (Undocumented) SBML MML
asu00720 (Undocumented) SBML MML
asu00730 Thiamine metabolism SBML MML
asu00740 Riboflavin metabolism SBML MML
asu00750 Vitamin B6 metabolism SBML MML
asu00760 Nicotinate and nicotinamide metabolism SBML MML
asu00770 Pantothenate and CoA biosynthesis SBML MML
asu00780 Biotin metabolism SBML MML
asu00790 Folate biosynthesis SBML MML
asu00791 Atrazine degradation SBML MML
asu00860 Porphyrin and chlorophyll metabolism SBML MML
asu00900 Terpenoid backbone biosynthesis SBML MML
asu00903 (Undocumented) SBML MML
asu00910 Nitrogen metabolism SBML MML
asu00920 Sulfur metabolism SBML MML
asu00930 Caprolactam degradation SBML MML
asu00940 (Undocumented) SBML MML
asu00950 (Undocumented) SBML MML
asu00960 (Undocumented) SBML MML
asu00970 Aminoacyl-tRNA biosynthesis SBML MML
asu00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
asu00982 (Undocumented) SBML MML
asu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.