This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ape: Aeropyrum pernix

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ape00010 Glycolysis / Gluconeogenesis SBML MML
ape00020 Citrate cycle (TCA cycle) SBML MML
ape00030 Pentose phosphate pathway SBML MML
ape00040 Pentose and glucuronate interconversions SBML MML
ape00051 Fructose and mannose metabolism SBML MML
ape00061 Fatty acid biosynthesis SBML MML
ape00062 Fatty acid elongation in mitochondria SBML MML
ape00071 Fatty acid metabolism SBML MML
ape00100 (Undocumented) SBML MML
ape00120 (Undocumented) SBML MML
ape00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ape00220 (Undocumented) SBML MML
ape00230 Purine metabolism SBML MML
ape00240 Pyrimidine metabolism SBML MML
ape00251 (Undocumented) SBML MML
ape00252 (Undocumented) SBML MML
ape00260 Glycine, serine and threonine metabolism SBML MML
ape00271 (Undocumented) SBML MML
ape00272 (Undocumented) SBML MML
ape00280 Valine, leucine and isoleucine degradation SBML MML
ape00281 Geraniol degradation SBML MML
ape00290 Valine, leucine and isoleucine biosynthesis SBML MML
ape00300 Lysine biosynthesis SBML MML
ape00310 Lysine degradation SBML MML
ape00330 Arginine and proline metabolism SBML MML
ape00340 Histidine metabolism SBML MML
ape00350 Tyrosine metabolism SBML MML
ape00360 Phenylalanine metabolism SBML MML
ape00380 Tryptophan metabolism SBML MML
ape00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ape00401 Novobiocin biosynthesis SBML MML
ape00410 beta-Alanine metabolism SBML MML
ape00430 Taurine and hypotaurine metabolism SBML MML
ape00450 Selenoamino acid metabolism SBML MML
ape00460 (Undocumented) SBML MML
ape00480 Glutathione metabolism SBML MML
ape00500 Starch and sucrose metabolism SBML MML
ape00520 Amino sugar and nucleotide sugar metabolism SBML MML
ape00521 Streptomycin biosynthesis SBML MML
ape00523 Polyketide sugar unit biosynthesis SBML MML
ape00550 Peptidoglycan biosynthesis SBML MML
ape00562 Inositol phosphate metabolism SBML MML
ape00564 Glycerophospholipid metabolism SBML MML
ape00565 Ether lipid metabolism SBML MML
ape00590 Arachidonic acid metabolism SBML MML
ape00592 alpha-Linolenic acid metabolism SBML MML
ape00620 Pyruvate metabolism SBML MML
ape00624 1- and 2-Methylnaphthalene degradation SBML MML
ape00630 Glyoxylate and dicarboxylate metabolism SBML MML
ape00632 (Undocumented) SBML MML
ape00640 Propanoate metabolism SBML MML
ape00641 3-Chloroacrylic acid degradation SBML MML
ape00643 Styrene degradation SBML MML
ape00650 Butanoate metabolism SBML MML
ape00660 C5-Branched dibasic acid metabolism SBML MML
ape00670 One carbon pool by folate SBML MML
ape00680 Methane metabolism SBML MML
ape00710 (Undocumented) SBML MML
ape00720 (Undocumented) SBML MML
ape00730 Thiamine metabolism SBML MML
ape00740 Riboflavin metabolism SBML MML
ape00750 Vitamin B6 metabolism SBML MML
ape00760 Nicotinate and nicotinamide metabolism SBML MML
ape00770 Pantothenate and CoA biosynthesis SBML MML
ape00785 Lipoic acid metabolism SBML MML
ape00790 Folate biosynthesis SBML MML
ape00860 Porphyrin and chlorophyll metabolism SBML MML
ape00900 Terpenoid backbone biosynthesis SBML MML
ape00903 (Undocumented) SBML MML
ape00910 Nitrogen metabolism SBML MML
ape00920 Sulfur metabolism SBML MML
ape00930 Caprolactam degradation SBML MML
ape00950 (Undocumented) SBML MML
ape00970 Aminoacyl-tRNA biosynthesis SBML MML
ape00982 (Undocumented) SBML MML
ape00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.