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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism apa: Actinobacillus pleuropneumoniae AP76 (serotype 7)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
apa00010 Glycolysis / Gluconeogenesis SBML MML
apa00020 Citrate cycle (TCA cycle) SBML MML
apa00030 Pentose phosphate pathway SBML MML
apa00040 Pentose and glucuronate interconversions SBML MML
apa00051 Fructose and mannose metabolism SBML MML
apa00052 Galactose metabolism SBML MML
apa00053 Ascorbate and aldarate metabolism SBML MML
apa00061 Fatty acid biosynthesis SBML MML
apa00071 Fatty acid metabolism SBML MML
apa00100 (Undocumented) SBML MML
apa00120 (Undocumented) SBML MML
apa00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
apa00220 (Undocumented) SBML MML
apa00230 Purine metabolism SBML MML
apa00240 Pyrimidine metabolism SBML MML
apa00251 (Undocumented) SBML MML
apa00252 (Undocumented) SBML MML
apa00260 Glycine, serine and threonine metabolism SBML MML
apa00271 (Undocumented) SBML MML
apa00272 (Undocumented) SBML MML
apa00280 Valine, leucine and isoleucine degradation SBML MML
apa00281 Geraniol degradation SBML MML
apa00290 Valine, leucine and isoleucine biosynthesis SBML MML
apa00300 Lysine biosynthesis SBML MML
apa00310 Lysine degradation SBML MML
apa00330 Arginine and proline metabolism SBML MML
apa00340 Histidine metabolism SBML MML
apa00350 Tyrosine metabolism SBML MML
apa00360 Phenylalanine metabolism SBML MML
apa00362 (Undocumented) SBML MML
apa00380 Tryptophan metabolism SBML MML
apa00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
apa00401 Novobiocin biosynthesis SBML MML
apa00410 beta-Alanine metabolism SBML MML
apa00430 Taurine and hypotaurine metabolism SBML MML
apa00450 Selenoamino acid metabolism SBML MML
apa00460 (Undocumented) SBML MML
apa00471 D-Glutamine and D-glutamate metabolism SBML MML
apa00473 D-Alanine metabolism SBML MML
apa00480 Glutathione metabolism SBML MML
apa00500 Starch and sucrose metabolism SBML MML
apa00520 Amino sugar and nucleotide sugar metabolism SBML MML
apa00521 Streptomycin biosynthesis SBML MML
apa00523 Polyketide sugar unit biosynthesis SBML MML
apa00530 (Undocumented) SBML MML
apa00540 Lipopolysaccharide biosynthesis SBML MML
apa00550 Peptidoglycan biosynthesis SBML MML
apa00561 Glycerolipid metabolism SBML MML
apa00562 Inositol phosphate metabolism SBML MML
apa00564 Glycerophospholipid metabolism SBML MML
apa00592 alpha-Linolenic acid metabolism SBML MML
apa00620 Pyruvate metabolism SBML MML
apa00624 1- and 2-Methylnaphthalene degradation SBML MML
apa00630 Glyoxylate and dicarboxylate metabolism SBML MML
apa00632 (Undocumented) SBML MML
apa00633 Trinitrotoluene degradation SBML MML
apa00640 Propanoate metabolism SBML MML
apa00641 3-Chloroacrylic acid degradation SBML MML
apa00642 Ethylbenzene degradation SBML MML
apa00650 Butanoate metabolism SBML MML
apa00660 C5-Branched dibasic acid metabolism SBML MML
apa00670 One carbon pool by folate SBML MML
apa00680 Methane metabolism SBML MML
apa00710 (Undocumented) SBML MML
apa00720 (Undocumented) SBML MML
apa00730 Thiamine metabolism SBML MML
apa00740 Riboflavin metabolism SBML MML
apa00750 Vitamin B6 metabolism SBML MML
apa00760 Nicotinate and nicotinamide metabolism SBML MML
apa00770 Pantothenate and CoA biosynthesis SBML MML
apa00780 Biotin metabolism SBML MML
apa00790 Folate biosynthesis SBML MML
apa00791 Atrazine degradation SBML MML
apa00860 Porphyrin and chlorophyll metabolism SBML MML
apa00900 Terpenoid backbone biosynthesis SBML MML
apa00903 (Undocumented) SBML MML
apa00910 Nitrogen metabolism SBML MML
apa00920 Sulfur metabolism SBML MML
apa00940 (Undocumented) SBML MML
apa00950 (Undocumented) SBML MML
apa00960 (Undocumented) SBML MML
apa00970 Aminoacyl-tRNA biosynthesis SBML MML
apa00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
apa00982 (Undocumented) SBML MML
apa00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.