This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism aoe: Alkaliphilus oremlandii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
aoe00010 Glycolysis / Gluconeogenesis SBML MML
aoe00020 Citrate cycle (TCA cycle) SBML MML
aoe00030 Pentose phosphate pathway SBML MML
aoe00040 Pentose and glucuronate interconversions SBML MML
aoe00051 Fructose and mannose metabolism SBML MML
aoe00052 Galactose metabolism SBML MML
aoe00061 Fatty acid biosynthesis SBML MML
aoe00071 Fatty acid metabolism SBML MML
aoe00072 Synthesis and degradation of ketone bodies SBML MML
aoe00100 (Undocumented) SBML MML
aoe00120 (Undocumented) SBML MML
aoe00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
aoe00220 (Undocumented) SBML MML
aoe00230 Purine metabolism SBML MML
aoe00240 Pyrimidine metabolism SBML MML
aoe00251 (Undocumented) SBML MML
aoe00252 (Undocumented) SBML MML
aoe00260 Glycine, serine and threonine metabolism SBML MML
aoe00271 (Undocumented) SBML MML
aoe00272 (Undocumented) SBML MML
aoe00280 Valine, leucine and isoleucine degradation SBML MML
aoe00281 Geraniol degradation SBML MML
aoe00290 Valine, leucine and isoleucine biosynthesis SBML MML
aoe00300 Lysine biosynthesis SBML MML
aoe00310 Lysine degradation SBML MML
aoe00330 Arginine and proline metabolism SBML MML
aoe00340 Histidine metabolism SBML MML
aoe00350 Tyrosine metabolism SBML MML
aoe00360 Phenylalanine metabolism SBML MML
aoe00361 gamma-Hexachlorocyclohexane degradation SBML MML
aoe00362 (Undocumented) SBML MML
aoe00380 Tryptophan metabolism SBML MML
aoe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
aoe00401 Novobiocin biosynthesis SBML MML
aoe00410 beta-Alanine metabolism SBML MML
aoe00450 Selenoamino acid metabolism SBML MML
aoe00460 (Undocumented) SBML MML
aoe00471 D-Glutamine and D-glutamate metabolism SBML MML
aoe00473 D-Alanine metabolism SBML MML
aoe00500 Starch and sucrose metabolism SBML MML
aoe00520 Amino sugar and nucleotide sugar metabolism SBML MML
aoe00530 (Undocumented) SBML MML
aoe00550 Peptidoglycan biosynthesis SBML MML
aoe00561 Glycerolipid metabolism SBML MML
aoe00564 Glycerophospholipid metabolism SBML MML
aoe00620 Pyruvate metabolism SBML MML
aoe00624 1- and 2-Methylnaphthalene degradation SBML MML
aoe00625 (Undocumented) SBML MML
aoe00630 Glyoxylate and dicarboxylate metabolism SBML MML
aoe00631 1,2-Dichloroethane degradation SBML MML
aoe00632 (Undocumented) SBML MML
aoe00640 Propanoate metabolism SBML MML
aoe00641 3-Chloroacrylic acid degradation SBML MML
aoe00650 Butanoate metabolism SBML MML
aoe00660 C5-Branched dibasic acid metabolism SBML MML
aoe00670 One carbon pool by folate SBML MML
aoe00680 Methane metabolism SBML MML
aoe00710 (Undocumented) SBML MML
aoe00720 (Undocumented) SBML MML
aoe00730 Thiamine metabolism SBML MML
aoe00750 Vitamin B6 metabolism SBML MML
aoe00760 Nicotinate and nicotinamide metabolism SBML MML
aoe00770 Pantothenate and CoA biosynthesis SBML MML
aoe00780 Biotin metabolism SBML MML
aoe00790 Folate biosynthesis SBML MML
aoe00860 Porphyrin and chlorophyll metabolism SBML MML
aoe00900 Terpenoid backbone biosynthesis SBML MML
aoe00903 (Undocumented) SBML MML
aoe00910 Nitrogen metabolism SBML MML
aoe00920 Sulfur metabolism SBML MML
aoe00940 (Undocumented) SBML MML
aoe00960 (Undocumented) SBML MML
aoe00970 Aminoacyl-tRNA biosynthesis SBML MML
aoe00982 (Undocumented) SBML MML
aoe00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.