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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism acl: Acholeplasma laidlawii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
acl00010 Glycolysis / Gluconeogenesis SBML MML
acl00030 Pentose phosphate pathway SBML MML
acl00031 (Undocumented) SBML MML
acl00040 Pentose and glucuronate interconversions SBML MML
acl00051 Fructose and mannose metabolism SBML MML
acl00052 Galactose metabolism SBML MML
acl00061 Fatty acid biosynthesis SBML MML
acl00071 Fatty acid metabolism SBML MML
acl00072 Synthesis and degradation of ketone bodies SBML MML
acl00100 (Undocumented) SBML MML
acl00120 (Undocumented) SBML MML
acl00220 (Undocumented) SBML MML
acl00230 Purine metabolism SBML MML
acl00240 Pyrimidine metabolism SBML MML
acl00251 (Undocumented) SBML MML
acl00252 (Undocumented) SBML MML
acl00260 Glycine, serine and threonine metabolism SBML MML
acl00271 (Undocumented) SBML MML
acl00272 (Undocumented) SBML MML
acl00280 Valine, leucine and isoleucine degradation SBML MML
acl00281 Geraniol degradation SBML MML
acl00290 Valine, leucine and isoleucine biosynthesis SBML MML
acl00300 Lysine biosynthesis SBML MML
acl00310 Lysine degradation SBML MML
acl00330 Arginine and proline metabolism SBML MML
acl00340 Histidine metabolism SBML MML
acl00350 Tyrosine metabolism SBML MML
acl00362 (Undocumented) SBML MML
acl00380 Tryptophan metabolism SBML MML
acl00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
acl00430 Taurine and hypotaurine metabolism SBML MML
acl00450 Selenoamino acid metabolism SBML MML
acl00460 (Undocumented) SBML MML
acl00480 Glutathione metabolism SBML MML
acl00500 Starch and sucrose metabolism SBML MML
acl00520 Amino sugar and nucleotide sugar metabolism SBML MML
acl00530 (Undocumented) SBML MML
acl00550 Peptidoglycan biosynthesis SBML MML
acl00561 Glycerolipid metabolism SBML MML
acl00564 Glycerophospholipid metabolism SBML MML
acl00590 Arachidonic acid metabolism SBML MML
acl00620 Pyruvate metabolism SBML MML
acl00624 1- and 2-Methylnaphthalene degradation SBML MML
acl00630 Glyoxylate and dicarboxylate metabolism SBML MML
acl00632 (Undocumented) SBML MML
acl00640 Propanoate metabolism SBML MML
acl00641 3-Chloroacrylic acid degradation SBML MML
acl00650 Butanoate metabolism SBML MML
acl00670 One carbon pool by folate SBML MML
acl00710 (Undocumented) SBML MML
acl00730 Thiamine metabolism SBML MML
acl00740 Riboflavin metabolism SBML MML
acl00760 Nicotinate and nicotinamide metabolism SBML MML
acl00770 Pantothenate and CoA biosynthesis SBML MML
acl00780 Biotin metabolism SBML MML
acl00785 Lipoic acid metabolism SBML MML
acl00790 Folate biosynthesis SBML MML
acl00860 Porphyrin and chlorophyll metabolism SBML MML
acl00900 Terpenoid backbone biosynthesis SBML MML
acl00903 (Undocumented) SBML MML
acl00906 Carotenoid biosynthesis SBML MML
acl00910 Nitrogen metabolism SBML MML
acl00960 (Undocumented) SBML MML
acl00970 Aminoacyl-tRNA biosynthesis SBML MML
acl00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
acl00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.